Gene
RNA
| Item | Value |
|---|---|
| gene id | G2090025 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 49122731 ~ 49122979 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2390770 | True | 249 | lncRNA | 0.50 | 1 | 49122731 | 49122979 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zmp:0000001236 | LOC106581583 | coding | upstream | 348050 | 48633372 ~ 48774681 (+) |
| gab2 | gab2 | coding | upstream | 498283 | 48460449 ~ 48624448 (+) |
| nars2 | nars2 | coding | upstream | 664292 | 48401253 ~ 48458439 (+) |
| tenm4 | tenm4 | coding | upstream | 803646 | 47640597 ~ 48319085 (+) |
| LOC118944690 | NA | coding | upstream | 1639697 | 47482390 ~ 47483034 (+) |
| pgr | LOC100846969 | coding | downstream | 78469 | 49201448 ~ 49266635 (+) |
| LOC118944717 | NA | coding | downstream | 200034 | 49323013 ~ 49323866 (+) |
| LOC110508133 | fbxo40 | coding | downstream | 1342904 | 50465883 ~ 50476608 (+) |
| LOC110507254 | nectin1 | coding | downstream | 1542740 | 50665719 ~ 50850459 (+) |
| LOC110508131 | LOC106613338 | coding | downstream | 2350541 | 51473520 ~ 51510450 (+) |
| G2090010 | NA | non-coding | upstream | 13061 | 49109427 ~ 49109670 (+) |
| G2090001 | NA | non-coding | upstream | 22853 | 49099304 ~ 49099878 (+) |
| G2089983 | NA | non-coding | upstream | 44074 | 49078453 ~ 49078657 (+) |
| G2089937 | NA | non-coding | upstream | 58273 | 49064090 ~ 49064458 (+) |
| G2089931 | NA | non-coding | upstream | 70362 | 49052146 ~ 49052369 (+) |
| G2090031 | NA | non-coding | downstream | 17791 | 49140770 ~ 49141054 (+) |
| trpc6b | LOC106581586 | non-coding | downstream | 19980 | 49089883 ~ 49186113 (+) |
| G2090034 | NA | non-coding | downstream | 24855 | 49147834 ~ 49153873 (+) |
| G2090036 | NA | non-coding | downstream | 39985 | 49162964 ~ 49163165 (+) |
| G2090037 | NA | non-coding | downstream | 44462 | 49167441 ~ 49169334 (+) |
| G2089935 | NA | other | upstream | 63836 | 49058005 ~ 49058895 (+) |
| G2089906 | NA | other | upstream | 195439 | 48926975 ~ 48927292 (+) |
| G2089124 | NA | other | upstream | 667245 | 48432478 ~ 48455486 (+) |
| G2089020 | NA | other | upstream | 931369 | 48188209 ~ 48191362 (+) |
| G2088870 | NA | other | upstream | 1257902 | 47854106 ~ 47864829 (+) |
| G2090091 | LOC106581584 | other | downstream | 189764 | 49312743 ~ 49316226 (+) |
| G2090103 | NA | other | downstream | 210468 | 49333447 ~ 49334183 (+) |
| G2090508 | NA | other | downstream | 662148 | 49782101 ~ 49788805 (+) |
| G2090638 | NA | other | downstream | 959084 | 50082063 ~ 50087691 (+) |
