G2090031


Basic Information

Item Value
gene id G2090031
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 49140770 ~ 49141054 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2390776
GCCTGTTCCCTGATCCATTTGTTGCCAGCTAGCCTGGTCCCTGATCCATTTGTTGCCAGCTAGCCTGGTCCCTGATATGTTTGTTGCCAGCTAGCCTGATCCCTGATCCATTTGTTGCCAGCTAGCCTGTTCCCTGATCCATTTGTTGCCAGCTAGTCTGGTCCCTGATCCATTTGTTGTCAGCTAGCCTGGCCCCTGATCAaattgtgctcttgccaactccattgctcattgtcaagccaaacggAAAGAAACCGGCACCCAAGCTAAAAAATATCACAGTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2390776 True 285 lncRNA 0.51 1 49140770 49141054

Neighbor

gene id symbol gene type direction distance location
zmp:0000001236 LOC106581583 coding upstream 366089 48633372 ~ 48774681 (+)
gab2 gab2 coding upstream 516322 48460449 ~ 48624448 (+)
nars2 nars2 coding upstream 682331 48401253 ~ 48458439 (+)
tenm4 tenm4 coding upstream 821685 47640597 ~ 48319085 (+)
LOC118944690 NA coding upstream 1657736 47482390 ~ 47483034 (+)
pgr LOC100846969 coding downstream 60394 49201448 ~ 49266635 (+)
LOC118944717 NA coding downstream 181959 49323013 ~ 49323866 (+)
LOC110508133 fbxo40 coding downstream 1324829 50465883 ~ 50476608 (+)
LOC110507254 nectin1 coding downstream 1524665 50665719 ~ 50850459 (+)
LOC110508131 LOC106613338 coding downstream 2332466 51473520 ~ 51510450 (+)
G2090025 NA non-coding upstream 17791 49122731 ~ 49122979 (+)
G2090010 NA non-coding upstream 31100 49109427 ~ 49109670 (+)
G2090001 NA non-coding upstream 40892 49099304 ~ 49099878 (+)
G2089983 NA non-coding upstream 62113 49078453 ~ 49078657 (+)
G2089937 NA non-coding upstream 76312 49064090 ~ 49064458 (+)
trpc6b LOC106581586 non-coding downstream 1905 49089883 ~ 49186113 (+)
G2090034 NA non-coding downstream 6780 49147834 ~ 49153873 (+)
G2090036 NA non-coding downstream 21910 49162964 ~ 49163165 (+)
G2090037 NA non-coding downstream 26387 49167441 ~ 49169334 (+)
G2090065 NA non-coding downstream 84411 49225465 ~ 49225698 (+)
G2089935 NA other upstream 81875 49058005 ~ 49058895 (+)
G2089906 NA other upstream 213478 48926975 ~ 48927292 (+)
G2089124 NA other upstream 685284 48432478 ~ 48455486 (+)
G2089020 NA other upstream 949408 48188209 ~ 48191362 (+)
G2088870 NA other upstream 1275941 47854106 ~ 47864829 (+)
G2090091 LOC106581584 other downstream 171689 49312743 ~ 49316226 (+)
G2090103 NA other downstream 192393 49333447 ~ 49334183 (+)
G2090508 NA other downstream 644073 49782101 ~ 49788805 (+)
G2090638 NA other downstream 941009 50082063 ~ 50087691 (+)

Expression


Co-expression Network