G2090034


Basic Information

Item Value
gene id G2090034
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 49147834 ~ 49153873 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2390779
gctcacggtcgccctgccagtgcggcgaggtggaatagcccgcactggactatgcaggcgaaccggagacaccgagcgcaaggctggtgccatgtaaaccggcccaaggagacgcactggggaccagctgcgtagagccggcttcatggcattaggctcgacgctcaatctagcccggcagacacgcggagctggaatataccgcaccgggctatgcacccgcactggagacaccgtgcgcaccactgcataacacggtgcctgtccggtctctctagccccccggtaagcacagggagtctgcccaggtctcctacctggcatagccatactccctgttagcccccccccaagaaatttttggggctgcctctcaagcttccatccgcgtcgccgagctgccttctcataccagcgcctctctgctttcaccgcctccattctacggtaaccttcctcgcactgctccagc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106595571

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2390779 True 472 lncRNA 0.62 2 49147834 49153873

Neighbor

gene id symbol gene type direction distance location
zmp:0000001236 LOC106581583 coding upstream 373153 48633372 ~ 48774681 (+)
gab2 gab2 coding upstream 523386 48460449 ~ 48624448 (+)
nars2 nars2 coding upstream 689395 48401253 ~ 48458439 (+)
tenm4 tenm4 coding upstream 828749 47640597 ~ 48319085 (+)
LOC118944690 NA coding upstream 1664800 47482390 ~ 47483034 (+)
pgr LOC100846969 coding downstream 47575 49201448 ~ 49266635 (+)
LOC118944717 NA coding downstream 169140 49323013 ~ 49323866 (+)
LOC110508133 fbxo40 coding downstream 1312010 50465883 ~ 50476608 (+)
LOC110507254 nectin1 coding downstream 1511846 50665719 ~ 50850459 (+)
LOC110508131 LOC106613338 coding downstream 2319647 51473520 ~ 51510450 (+)
trpc6b LOC106581586 non-coding upstream 4562 49089883 ~ 49186113 (+)
G2090031 NA non-coding upstream 6780 49140770 ~ 49141054 (+)
G2090025 NA non-coding upstream 24855 49122731 ~ 49122979 (+)
G2090010 NA non-coding upstream 38164 49109427 ~ 49109670 (+)
G2090001 NA non-coding upstream 47956 49099304 ~ 49099878 (+)
G2090036 NA non-coding downstream 9091 49162964 ~ 49163165 (+)
G2090037 NA non-coding downstream 13568 49167441 ~ 49169334 (+)
G2090065 NA non-coding downstream 71592 49225465 ~ 49225698 (+)
G2090066 NA non-coding downstream 72363 49226236 ~ 49226471 (+)
G2090077 NA non-coding downstream 95034 49248907 ~ 49249491 (+)
G2089935 NA other upstream 88939 49058005 ~ 49058895 (+)
G2089906 NA other upstream 220542 48926975 ~ 48927292 (+)
G2089124 NA other upstream 692348 48432478 ~ 48455486 (+)
G2089020 NA other upstream 956472 48188209 ~ 48191362 (+)
G2088870 NA other upstream 1283005 47854106 ~ 47864829 (+)
G2090091 LOC106581584 other downstream 158870 49312743 ~ 49316226 (+)
G2090103 NA other downstream 179574 49333447 ~ 49334183 (+)
G2090508 NA other downstream 631254 49782101 ~ 49788805 (+)
G2090638 NA other downstream 928190 50082063 ~ 50087691 (+)

Expression


Co-expression Network