G2090065


Basic Information

Item Value
gene id G2090065
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 49225465 ~ 49225698 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2390815
gtggtaggcttgattaccaacaacgacgagacggcctacagggaggaggtgagggccctcggagtgtggtgtcaggaaaataacctcacactcaacgtcaacaaaacttaggagatgattgtggacttcaggaaacagcagagggaacacccccctatccacatcgatggaacagtagtggagagggtagcaagttttaagttcctcggcatacacatcacagacaaactgaat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2390815 True 234 lncRNA 0.50 1 49225465 49225698

Neighbor

gene id symbol gene type direction distance location
trpc6b LOC106581586 coding upstream 39352 49089883 ~ 49186113 (+)
zmp:0000001236 LOC106581583 coding upstream 450784 48633372 ~ 48774681 (+)
gab2 gab2 coding upstream 601017 48460449 ~ 48624448 (+)
nars2 nars2 coding upstream 767026 48401253 ~ 48458439 (+)
tenm4 tenm4 coding upstream 906380 47640597 ~ 48319085 (+)
LOC118944717 NA coding downstream 97315 49323013 ~ 49323866 (+)
LOC110508133 fbxo40 coding downstream 1240185 50465883 ~ 50476608 (+)
LOC110507254 nectin1 coding downstream 1440021 50665719 ~ 50850459 (+)
LOC110508131 LOC106613338 coding downstream 2247822 51473520 ~ 51510450 (+)
G2090037 NA non-coding upstream 56131 49167441 ~ 49169334 (+)
G2090036 NA non-coding upstream 62300 49162964 ~ 49163165 (+)
G2090034 NA non-coding upstream 71592 49147834 ~ 49153873 (+)
G2090031 NA non-coding upstream 84411 49140770 ~ 49141054 (+)
G2090066 NA non-coding downstream 538 49226236 ~ 49226471 (+)
G2090077 NA non-coding downstream 23209 49248907 ~ 49249491 (+)
G2090079 NA non-coding downstream 24904 49250602 ~ 49250839 (+)
G2090085 NA non-coding downstream 36362 49262060 ~ 49262439 (+)
G2090086 NA non-coding downstream 36869 49262567 ~ 49262974 (+)
G2089935 NA other upstream 166570 49058005 ~ 49058895 (+)
G2089906 NA other upstream 298173 48926975 ~ 48927292 (+)
G2089124 NA other upstream 769979 48432478 ~ 48455486 (+)
G2089020 NA other upstream 1034103 48188209 ~ 48191362 (+)
G2088870 NA other upstream 1360636 47854106 ~ 47864829 (+)
G2090091 LOC106581584 other downstream 87045 49312743 ~ 49316226 (+)
G2090103 NA other downstream 107749 49333447 ~ 49334183 (+)
G2090508 NA other downstream 559429 49782101 ~ 49788805 (+)
G2090638 NA other downstream 856365 50082063 ~ 50087691 (+)

Expression


Co-expression Network