G2090085


Basic Information

Item Value
gene id G2090085
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 49262060 ~ 49262439 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2390836
tagatcaaggtatgatgtggaagttgaatattcccctgttcctttagatcaaggtatgatatggaagtttaatattcccctgttcctttagatcaaggtatgatatggaagttgaatattcccctgttcctttagatcaaggtatgatatggaagttgaatattcccctgttcctttagatcaaggtatgatatggaagttgaatattcccctgttcctttagatcaaggtatgatatggaagttgaatattcccctgttcctttagatcaaggtatgatatggaagttgaatattcccctgttcctttagatcaaggtatgatatggaagttgaatattcccctgttcctttagatcaaggtatgatgtggaagttgaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2390836 True 380 lncRNA 0.36 1 49262060 49262439

Neighbor

gene id symbol gene type direction distance location
trpc6b LOC106581586 coding upstream 75947 49089883 ~ 49186113 (+)
zmp:0000001236 LOC106581583 coding upstream 487379 48633372 ~ 48774681 (+)
gab2 gab2 coding upstream 637612 48460449 ~ 48624448 (+)
nars2 nars2 coding upstream 803621 48401253 ~ 48458439 (+)
tenm4 tenm4 coding upstream 942975 47640597 ~ 48319085 (+)
LOC118944717 NA coding downstream 60574 49323013 ~ 49323866 (+)
LOC110508133 fbxo40 coding downstream 1203444 50465883 ~ 50476608 (+)
LOC110507254 nectin1 coding downstream 1403280 50665719 ~ 50850459 (+)
LOC110508131 LOC106613338 coding downstream 2211081 51473520 ~ 51510450 (+)
G2090079 NA non-coding upstream 11221 49250602 ~ 49250839 (+)
G2090077 NA non-coding upstream 12569 49248907 ~ 49249491 (+)
G2090066 NA non-coding upstream 35589 49226236 ~ 49226471 (+)
G2090065 NA non-coding upstream 36362 49225465 ~ 49225698 (+)
G2090037 NA non-coding upstream 92726 49167441 ~ 49169334 (+)
G2090086 NA non-coding downstream 128 49262567 ~ 49262974 (+)
G2090093 NA non-coding downstream 54189 49316628 ~ 49317091 (+)
G2090100 NA non-coding downstream 59414 49321853 ~ 49322105 (+)
G2090102 NA non-coding downstream 70724 49333163 ~ 49333394 (+)
G2090104 NA non-coding downstream 71836 49334275 ~ 49334820 (+)
G2089935 NA other upstream 203165 49058005 ~ 49058895 (+)
G2089906 NA other upstream 334768 48926975 ~ 48927292 (+)
G2089124 NA other upstream 806574 48432478 ~ 48455486 (+)
G2089020 NA other upstream 1070698 48188209 ~ 48191362 (+)
G2088870 NA other upstream 1397231 47854106 ~ 47864829 (+)
G2090091 LOC106581584 other downstream 50304 49312743 ~ 49316226 (+)
G2090103 NA other downstream 71008 49333447 ~ 49334183 (+)
G2090508 NA other downstream 522688 49782101 ~ 49788805 (+)
G2090638 NA other downstream 819624 50082063 ~ 50087691 (+)

Expression


Co-expression Network