G2090091 (LOC106581584)


Basic Information

Item Value
gene id G2090091
gene name LOC106581584
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 49312743 ~ 49316226 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2390846
AGAGGGAGCGGCTGAGCGGTTCAGCTGGGTCAGTTGGGTCACGGGCACCGGCCGGAGATCCGTCTGGGAGTGGGGGGCTTTCTTCGGGCCGATGGACCCCCTGGGTGTAGCTGTGGTGCTGGTTGAGGACAGACTCAGAGCATCTCCCTCCGACTCCCcgtctgtcctccctgtctccacgTCTTCCCTGGAGCTAGACTCTGGGCTGCTGAGGCAGGATGGGACACTTCCCTTCCCTGGCCCGTTGGAAGAGAGCTGTGAGGGGGAGCGACGGAGACCCAGTGTTGGGCCCTGACCCATCTCCTGCCCCATACTGGTCCCCTGACCCATCTCCTGCCCCAGGCTGGTCCCCTGACCCATCCCCTGCTTCAGGCTGGTACCCTGACCCATCCCCAGCCACTGGCTCGTCCCCTGCCCCATCCCCAGCCACAGGCCAGGGGGATGGGAAGCCTTGTCTTTGGGCTGGTGGTGGGAGGAAGTGCCAGTGGTCTTGGAGGAGCTGTTCTGCtcagaggagtgggaggagagggactCCATGCTTCCCAAGGGGGTGCTGCCTGGACTGCTGCTGAACGTGTCACCTGTACAAGGACTGTCAGCGTCTGCAAGGCACAGTGTTGGGGTGTAGATGCTGCGAGGCTTCCTAGGGCCTGTGGACAGGCAGATGGCCCTGCTCCTGCGTGAGCTTGGTCGGGATTGGGGCTGGGGCAGAGGTACGTTGGGGTCTGGAGGCTGGT

Function

NR:

description
rho GTPase-activating protein 42

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2390846 True 737 TUCP 0.64 2 49312743 49316226

Neighbor

gene id symbol gene type direction distance location
pgr LOC100846969 coding upstream 46108 49201448 ~ 49266635 (+)
trpc6b LOC106581586 coding upstream 126630 49089883 ~ 49186113 (+)
zmp:0000001236 LOC106581583 coding upstream 538062 48633372 ~ 48774681 (+)
gab2 gab2 coding upstream 688295 48460449 ~ 48624448 (+)
nars2 nars2 coding upstream 854304 48401253 ~ 48458439 (+)
LOC118944717 NA coding downstream 6787 49323013 ~ 49323866 (+)
LOC110508133 fbxo40 coding downstream 1149657 50465883 ~ 50476608 (+)
LOC110507254 nectin1 coding downstream 1349493 50665719 ~ 50850459 (+)
LOC110508131 LOC106613338 coding downstream 2157294 51473520 ~ 51510450 (+)
G2090086 NA non-coding upstream 49769 49262567 ~ 49262974 (+)
G2090085 NA non-coding upstream 50304 49262060 ~ 49262439 (+)
G2090079 NA non-coding upstream 61904 49250602 ~ 49250839 (+)
G2090077 NA non-coding upstream 63252 49248907 ~ 49249491 (+)
G2090066 NA non-coding upstream 86272 49226236 ~ 49226471 (+)
G2090093 NA non-coding downstream 402 49316628 ~ 49317091 (+)
G2090100 NA non-coding downstream 5627 49321853 ~ 49322105 (+)
G2090102 NA non-coding downstream 16937 49333163 ~ 49333394 (+)
G2090104 NA non-coding downstream 18049 49334275 ~ 49334820 (+)
G2090105 NA non-coding downstream 18662 49334888 ~ 49337253 (+)
G2089935 NA other upstream 253848 49058005 ~ 49058895 (+)
G2089906 NA other upstream 385451 48926975 ~ 48927292 (+)
G2089124 NA other upstream 857257 48432478 ~ 48455486 (+)
G2089020 NA other upstream 1121381 48188209 ~ 48191362 (+)
G2088870 NA other upstream 1447914 47854106 ~ 47864829 (+)
G2090103 NA other downstream 17221 49333447 ~ 49334183 (+)
G2090508 NA other downstream 468901 49782101 ~ 49788805 (+)
G2090638 NA other downstream 765837 50082063 ~ 50087691 (+)
G2091093 NA other downstream 1036142 50352368 ~ 50353167 (+)

Expression


Co-expression Network