G2090104


Basic Information

Item Value
gene id G2090104
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 49334275 ~ 49334820 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2390859
GTAAAGagaccttcatagaaaatgactccagtaaaagtgaaagtcacccagtaaaagtctaaaagtatttggttttaaatacacttaagtatcaCAAGTAAATGGCGTTCCTAAATAATACTTAAGtaacaaaagtaaaagtataaataatttcaaattctttatatttcgcaaaccagacggcacaattgacttggttttttaaaaatgattattgaggaatagccaggggcacactccaacattcagacataatttacaaatgaagcattttaTGTTTAGtgtgtctgccagatcagaggcattagggaaaacggcaaaatgtaacgagtacttttgggtgtcaggctaaatgtatggagtaaaaataacataattttctttaggaatatggtgaagtaaaagtaaaagttggcaaaaaataTACGTAGTAAAGTGAAGTACAGATATCCcaccaaaaaactacttaagtagtactttaaagtatttttacttaagtactttacaccactgaaacacacacacacacacacacacacacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2390859 True 546 lncRNA 0.32 1 49334275 49334820

Neighbor

gene id symbol gene type direction distance location
LOC118944717 NA coding upstream 10409 49323013 ~ 49323866 (+)
pgr LOC100846969 coding upstream 67640 49201448 ~ 49266635 (+)
trpc6b LOC106581586 coding upstream 148162 49089883 ~ 49186113 (+)
zmp:0000001236 LOC106581583 coding upstream 559594 48633372 ~ 48774681 (+)
gab2 gab2 coding upstream 709827 48460449 ~ 48624448 (+)
LOC110508133 fbxo40 coding downstream 1131063 50465883 ~ 50476608 (+)
LOC110507254 nectin1 coding downstream 1330899 50665719 ~ 50850459 (+)
LOC110508131 LOC106613338 coding downstream 2138700 51473520 ~ 51510450 (+)
G2090102 NA non-coding upstream 881 49333163 ~ 49333394 (+)
G2090100 NA non-coding upstream 12170 49321853 ~ 49322105 (+)
G2090093 NA non-coding upstream 17184 49316628 ~ 49317091 (+)
G2090086 NA non-coding upstream 71301 49262567 ~ 49262974 (+)
G2090085 NA non-coding upstream 71836 49262060 ~ 49262439 (+)
G2090105 NA non-coding downstream 68 49334888 ~ 49337253 (+)
G2090106 NA non-coding downstream 3717 49338537 ~ 49338934 (+)
G2090108 NA non-coding downstream 6077 49340897 ~ 49341159 (+)
G2090109 NA non-coding downstream 7574 49342394 ~ 49342868 (+)
G2090110 NA non-coding downstream 12768 49347588 ~ 49347958 (+)
G2090103 NA other upstream 92 49333447 ~ 49334183 (+)
G2090091 LOC106581584 other upstream 18049 49312743 ~ 49316226 (+)
G2089935 NA other upstream 275380 49058005 ~ 49058895 (+)
G2089906 NA other upstream 406983 48926975 ~ 48927292 (+)
G2090508 NA other downstream 450307 49782101 ~ 49788805 (+)
G2090638 NA other downstream 747243 50082063 ~ 50087691 (+)
G2091093 NA other downstream 1017548 50352368 ~ 50353167 (+)
G2091895 NA other downstream 2034944 51369764 ~ 51370763 (+)
G2091960 NA other downstream 2135068 51469888 ~ 51470391 (+)

Expression


Co-expression Network