G2090105


Basic Information

Item Value
gene id G2090105
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 49334888 ~ 49337253 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2390860
TGGTTACCGTGTTTGGTCATGTAGGATTAGAGTGAGACTGAGTTCAGCACTCTATTTTGACAGCTGAAGCCCAGGAGAAGGGATAAAAAATGGCTGCTGTGATGACTCACCTCGTACCTCCACCAAGTCAATACATTTCCTCACAAAATTAAACCCTGCCTCGTTTAGGTACGCTGTAACACAGGGAACACAAAGGAGCAGGGTTGACTGGGTTCAATACACAGAACACAAGGTTCCCAAGGGGCTCctgttgaaaagtagtgcactacacagagGGAATAGGGGGCGATTGTGGAGAAATCCTCAGAGTGGTGTGATTGCAGCTGttctctcacacagacagtgtgtacTAATGATGGTCCACACTATTCAAATGACTCTGAGTTAATAAGTAGAAGTGGATGGctacagacaacaacaacaacaacaacaacaagggttAGAATTAGATAATGCATCTGTTATTACACATATTATTCACTCTTTGTACATCTAGGAGAGTCAGAAATATTCTACattgtacatgtgttgtgtagtatattgtacatgtgttgtgtagtatattgtacatgtgttgtgtagtatattgtacatgtgttgtgtagtatatttgacatgtgttgtgtagtatattgtacatgtgttgtgtagtatattgtacatgtgttgtgtagtatactgtaaatgtgttgtgtagtatatttgacatgtgttgtgtagtatatttgacatgtgttgtgtagtatattgtacatgtgttgtgtagtatattgtacatgtgttgtgtagtatattttacatgtgttgtgtagtatattgtacatgtgttgtgtagtatatttgacatgtgttgtgtagtatatttgacatgtgttgtgtagtatattgtacATGTGTTGGGTAGTATGTTGCACATATGTTGTTTAGTATATTtgacatgtgttgtgtagtatatttgacatgtgttgtgtagtatattgtacatgtgttgtgtagtatattgtacatgtgttgtgtagtatatttgacatgtgttgtgtagtatatttgacatgtgttgtgtagtatatttgacatgtgttgtgtagtatatttgacatgtgttgtgtagtatattgtacATGTGTTGGGTAGTATGTTGCACATATGTTGTTTAGTATATTtgacatgtgttgtgtagtatattgtacatgtgttgtgtagtatatttgacatgtgttgtgtagtatatttgacatgtgttgtgtagtatattgtacatgtgttgtgtagtatactgtacatgtgttgtgtagtatattgtacatgtgttgtgtagtatattgtacatgtgttgtgtagtatattgtacatatgttgtgtagtatatttgacatgtgttgtgtagtatattgtacatgtgttgtgtagtatatttgacatgtgttgtgtagtatatttgacatgtgttgtgtagtatattgtacatgtgttgtgtagtatatttgacatgtgttgtgtagtatattgtacatg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106533168

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2390860 True 1515 lncRNA 0.35 3 49334888 49337253

Neighbor

gene id symbol gene type direction distance location
LOC118944717 NA coding upstream 11022 49323013 ~ 49323866 (+)
pgr LOC100846969 coding upstream 68253 49201448 ~ 49266635 (+)
trpc6b LOC106581586 coding upstream 148775 49089883 ~ 49186113 (+)
zmp:0000001236 LOC106581583 coding upstream 560207 48633372 ~ 48774681 (+)
gab2 gab2 coding upstream 710440 48460449 ~ 48624448 (+)
LOC110508133 fbxo40 coding downstream 1128630 50465883 ~ 50476608 (+)
LOC110507254 nectin1 coding downstream 1328466 50665719 ~ 50850459 (+)
LOC110508131 LOC106613338 coding downstream 2136267 51473520 ~ 51510450 (+)
G2090104 NA non-coding upstream 68 49334275 ~ 49334820 (+)
G2090102 NA non-coding upstream 1494 49333163 ~ 49333394 (+)
G2090100 NA non-coding upstream 12783 49321853 ~ 49322105 (+)
G2090093 NA non-coding upstream 17797 49316628 ~ 49317091 (+)
G2090086 NA non-coding upstream 71914 49262567 ~ 49262974 (+)
G2090106 NA non-coding downstream 1284 49338537 ~ 49338934 (+)
G2090108 NA non-coding downstream 3644 49340897 ~ 49341159 (+)
G2090109 NA non-coding downstream 5141 49342394 ~ 49342868 (+)
G2090110 NA non-coding downstream 10335 49347588 ~ 49347958 (+)
G2090111 NA non-coding downstream 11053 49348306 ~ 49348821 (+)
G2090103 NA other upstream 705 49333447 ~ 49334183 (+)
G2090091 LOC106581584 other upstream 18662 49312743 ~ 49316226 (+)
G2089935 NA other upstream 275993 49058005 ~ 49058895 (+)
G2089906 NA other upstream 407596 48926975 ~ 48927292 (+)
G2090508 NA other downstream 447874 49782101 ~ 49788805 (+)
G2090638 NA other downstream 744810 50082063 ~ 50087691 (+)
G2091093 NA other downstream 1015115 50352368 ~ 50353167 (+)
G2091895 NA other downstream 2032511 51369764 ~ 51370763 (+)
G2091960 NA other downstream 2132635 51469888 ~ 51470391 (+)

Expression


Co-expression Network