G2090106


Basic Information

Item Value
gene id G2090106
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 49338537 ~ 49338934 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2390861
acatgtgttgtgtagtatattgtacatgtgttgtgtagtatattgtacatgtgttgtgtagtatatttgacatgtgttgtgtagtatatttgacatgtgttgtgtagtatattgtacatgtgttgtgtagtatattgtacatttgttgtgtagtatattgtacatgtgttgtgtagtatatttgacatgtgttgtgtagtatatttgacatgtgttgtgtagtatattgtacatgtgttgtgtagtatatttgatatgtgttgtgtagtatattttacatgtgttgtgtattatattgtacatgtgttgtgtagtatatttgacatgtgttgtgtagtatattgtacatgtgttgtgtagtatatttgacatgtgttgtgtagtatattgtacatgtg

Function

NR:

description
PREDICTED: rho GTPase-activating protein 42-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2390861 True 398 lncRNA 0.30 1 49338537 49338934

Neighbor

gene id symbol gene type direction distance location
LOC118944717 NA coding upstream 14671 49323013 ~ 49323866 (+)
pgr LOC100846969 coding upstream 71902 49201448 ~ 49266635 (+)
trpc6b LOC106581586 coding upstream 152424 49089883 ~ 49186113 (+)
zmp:0000001236 LOC106581583 coding upstream 563856 48633372 ~ 48774681 (+)
gab2 gab2 coding upstream 714089 48460449 ~ 48624448 (+)
LOC110508133 fbxo40 coding downstream 1126949 50465883 ~ 50476608 (+)
LOC110507254 nectin1 coding downstream 1326785 50665719 ~ 50850459 (+)
LOC110508131 LOC106613338 coding downstream 2134586 51473520 ~ 51510450 (+)
G2090105 NA non-coding upstream 1284 49334888 ~ 49337253 (+)
G2090104 NA non-coding upstream 3717 49334275 ~ 49334820 (+)
G2090102 NA non-coding upstream 5143 49333163 ~ 49333394 (+)
G2090100 NA non-coding upstream 16432 49321853 ~ 49322105 (+)
G2090093 NA non-coding upstream 21446 49316628 ~ 49317091 (+)
G2090108 NA non-coding downstream 1963 49340897 ~ 49341159 (+)
G2090109 NA non-coding downstream 3460 49342394 ~ 49342868 (+)
G2090110 NA non-coding downstream 8654 49347588 ~ 49347958 (+)
G2090111 NA non-coding downstream 9372 49348306 ~ 49348821 (+)
G2090112 NA non-coding downstream 10333 49349267 ~ 49349613 (+)
G2090103 NA other upstream 4354 49333447 ~ 49334183 (+)
G2090091 LOC106581584 other upstream 22311 49312743 ~ 49316226 (+)
G2089935 NA other upstream 279642 49058005 ~ 49058895 (+)
G2089906 NA other upstream 411245 48926975 ~ 48927292 (+)
G2090508 NA other downstream 446193 49782101 ~ 49788805 (+)
G2090638 NA other downstream 743129 50082063 ~ 50087691 (+)
G2091093 NA other downstream 1013434 50352368 ~ 50353167 (+)
G2091895 NA other downstream 2030830 51369764 ~ 51370763 (+)
G2091960 NA other downstream 2130954 51469888 ~ 51470391 (+)

Expression


Co-expression Network