G2090161


Basic Information

Item Value
gene id G2090161
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 49470835 ~ 49471117 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2390919
cctaaacagagagtacacagagtaCCTGCCCACTGTGACTGGCCCAAAGGTAAGAAAaaccttgactatgtacagatgtAGTGTGCATAGCCCTGCTATTGAGAGAGGTCGCCATGATCTGGGCGCCCAGGTGTCATCCATTTTCcttattatcccctgtgtatttatacctgtgttctctgtctgtttgttgccagttcgtcttgttcgtTCCATACCATTCTAACCAGCGTGTTCCTGTCAGCTCCTTtcgtttcccagcctctcttttctCGTccacctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2390919 True 283 lncRNA 0.48 1 49470835 49471117

Neighbor

gene id symbol gene type direction distance location
LOC118944717 NA coding upstream 146969 49323013 ~ 49323866 (+)
pgr LOC100846969 coding upstream 204200 49201448 ~ 49266635 (+)
trpc6b LOC106581586 coding upstream 284722 49089883 ~ 49186113 (+)
zmp:0000001236 LOC106581583 coding upstream 696154 48633372 ~ 48774681 (+)
gab2 gab2 coding upstream 846387 48460449 ~ 48624448 (+)
LOC110508133 fbxo40 coding downstream 994766 50465883 ~ 50476608 (+)
LOC110507254 nectin1 coding downstream 1194602 50665719 ~ 50850459 (+)
LOC110508131 LOC106613338 coding downstream 2002403 51473520 ~ 51510450 (+)
G2090156 NA non-coding upstream 5655 49464765 ~ 49465180 (+)
G2090155 NA non-coding upstream 10136 49460486 ~ 49460699 (+)
G2090152 NA non-coding upstream 20871 49449745 ~ 49449964 (+)
G2090123 NA non-coding upstream 25488 49371110 ~ 49445347 (+)
G2090114 NA non-coding upstream 117186 49352547 ~ 49353649 (+)
G2090162 NA non-coding downstream 1363 49472480 ~ 49475238 (+)
G2090166 NA non-coding downstream 8692 49479809 ~ 49480360 (+)
G2090170 NA non-coding downstream 14264 49485381 ~ 49486055 (+)
G2090199 NA non-coding downstream 62576 49533693 ~ 49567533 (+)
G2090202 NA non-coding downstream 74947 49546064 ~ 49558005 (+)
G2090103 NA other upstream 136652 49333447 ~ 49334183 (+)
G2090091 LOC106581584 other upstream 154609 49312743 ~ 49316226 (+)
G2089935 NA other upstream 411940 49058005 ~ 49058895 (+)
G2089906 NA other upstream 543543 48926975 ~ 48927292 (+)
G2090508 NA other downstream 314010 49782101 ~ 49788805 (+)
G2090638 NA other downstream 610946 50082063 ~ 50087691 (+)
G2091093 NA other downstream 881251 50352368 ~ 50353167 (+)
G2091895 NA other downstream 1898647 51369764 ~ 51370763 (+)
G2091960 NA other downstream 1998771 51469888 ~ 51470391 (+)

Expression


Co-expression Network