G2090199


Basic Information

Item Value
gene id G2090199
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 49533693 ~ 49567533 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2390968
tccataataaaccccgggaagagtagctgctgccttggtaacaggaactaatggggatccataatataccctaggaagagtagctgctgccttgacaggaactaatggggatccaaaataaaccccaggaagagtagctgctggtttggcagcagctaatggggatccataataaaccccaggaagaTAgtctgctggtttggcagcagctaatggggatccataataaaccccaggaagagtagctgctggtttggcaggaactaatggggatccataataaaccccaggaagagtagctgctggtttggcagcagctaatggggatccataataaaccccaggaagaatagctgctggtttggcaggaactaatagggatccataataaaccccaggaagagtagctgctggtttggcagcagctaatggggatccataatagcTGCTGgtttgcaggaactaatggggatccataataaaccccaggaagagtagctgctggtttggcagccgctaatggtgatccataataaaccccaggaagagtagctgctggtttggcagcagctaatggggatccataataaaccccaggaagagtagctgctggtttggcagcagctaatggggatccataataaaccccaggaagagtagctgctggcttggcaggaactaatggggatccataataaaccccaggaagagtagctgctggtttggcaggaactaatggggatccataataaaccccaggaagagtagctgctggtttggcagcagctaatggggatccataataaaccccaggaagagtagctgctggtttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgtcttggcaggaactaatggggatccataataaaccccaggaagagtagctgctggtttggcaggaactaatggg
>TU2390969
aatggggatccataataaaccccaggaagagtagctgctggtttggcagcagctaatggggatccataataaaccccaggaagagtagctgctggtttgcaggaactaatggggatccataataaaccccaggaagagtagctgctggtttggcaggaactaatagggatccataataaaccccaggaagagtagctgctggtttggcagcagctaatggggatccataatagcTGCTGgtttgcaggaactaatggggatccataataaaccccaggaagagtagctgctggtttggcagccgctaatggtgatccataataaaccccaggaagagtagctgctggtttggcagcagctaatggggatccataataaaccccaggaagagtagctgctggtttggcagcagctaatggggatccataataaaccccaggaagagtagctgctggcttggcaggaactaatggggatccataataaaccccaggaagagtagctgctggtttggcaggaactaatggggatccataataaaccccaggaagagtagctgctggtttggcagcagctaatggggatccataataaaccccaggaagagtagctgctggtttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgtcttggcaggaactaatggggatccataataaaccccaggaagagtagctgctggtttggcaggaactaatggg

Function

NR:

description
uncharacterized protein LOC100142646

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2390968 False 956 lncRNA 0.49 2 49533693 49567533
TU2390969 True 744 lncRNA 0.49 2 49561872 49567533

Neighbor

gene id symbol gene type direction distance location
LOC118944717 NA coding upstream 209827 49323013 ~ 49323866 (+)
pgr LOC100846969 coding upstream 267058 49201448 ~ 49266635 (+)
trpc6b LOC106581586 coding upstream 347580 49089883 ~ 49186113 (+)
zmp:0000001236 LOC106581583 coding upstream 759012 48633372 ~ 48774681 (+)
gab2 gab2 coding upstream 909245 48460449 ~ 48624448 (+)
LOC110508133 fbxo40 coding downstream 898350 50465883 ~ 50476608 (+)
LOC110507254 nectin1 coding downstream 1098186 50665719 ~ 50850459 (+)
LOC110508131 LOC106613338 coding downstream 1905987 51473520 ~ 51510450 (+)
G2090170 NA non-coding upstream 47638 49485381 ~ 49486055 (+)
G2090166 NA non-coding upstream 53333 49479809 ~ 49480360 (+)
G2090162 NA non-coding upstream 58455 49472480 ~ 49475238 (+)
G2090161 NA non-coding upstream 62576 49470835 ~ 49471117 (+)
G2090156 NA non-coding upstream 68513 49464765 ~ 49465180 (+)
G2090398 NA non-coding downstream 29718 49597251 ~ 49597460 (+)
G2090406 NA non-coding downstream 40001 49607534 ~ 49607846 (+)
G2090407 NA non-coding downstream 40743 49608276 ~ 49656978 (+)
G2090424 NA non-coding downstream 73761 49641294 ~ 49642939 (+)
G2090454 NA non-coding downstream 121152 49688685 ~ 49689513 (+)
G2090103 NA other upstream 199510 49333447 ~ 49334183 (+)
G2090091 LOC106581584 other upstream 217467 49312743 ~ 49316226 (+)
G2089935 NA other upstream 474798 49058005 ~ 49058895 (+)
G2089906 NA other upstream 606401 48926975 ~ 48927292 (+)
G2090508 NA other downstream 217594 49782101 ~ 49788805 (+)
G2090638 NA other downstream 514530 50082063 ~ 50087691 (+)
G2091093 NA other downstream 784835 50352368 ~ 50353167 (+)
G2091895 NA other downstream 1802231 51369764 ~ 51370763 (+)
G2091960 NA other downstream 1902355 51469888 ~ 51470391 (+)

Expression


Co-expression Network