G2090454


Basic Information

Item Value
gene id G2090454
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 49688685 ~ 49689513 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2391267
tgtaactgatgtgaaacggctagcttagttagcgtgggcgctaaatagcgtttcaatcagtgacgtcacttgctctgagaccttgaagtagtagttccccttgctctgcaagggccgcggcttttgtggcgcgatgggtaacgatgcttcgagggtgactgttgatgtgtgcagaaggtccctagttcgcgcccgggtatgggcgaggggacggtctaaatttgtactgttacattgatgctgttgacccggattactggttgctgcggaaaaaggaggaaggtcaaaaggggggtgagtgtaactgatgtgaaacggctagcttagttagcgtgggcgctaaatagcgtttcaatcagtgacgtcacttgctctgagaccttgaagtagtagttccccttgctctgcaagggccgcggcttttgtggcgcgatgggtaacgatgcttcgagggtgactgttgatgtgtgcagaaggtccctggttcgcgcccgggtatgggcgaggggacggtctaaatttgtactgtt
>TU2391268
tgtaactgatgtgaaacggctagcttagttagcgtgggcgctaaatagcgtttcaatcagtgacgtcacttgctctgagaccttgaagtagtagttccccttgctctgcaagggccgcggcttttgtggcgcgatgggtaacgatgcttcgagggtgactgttgatgtgtgcagaaggtccctagttcgcgcccgggtatgggcgaggggacggtctaaatttgtactgttacattgatgctgttgacccggattactggttgctgcggaaaaaggaggaaggtcaaaaggggggtgagtgtaactgatgtgaaacggctagcttagttagcgtgggcgctaaatagcgtttcaatcagtgacgtcacttgctctgagaccttgaagtagtagttccccttgctctgcaagggccgcggcttttgtggcgcgatgggtaacgatgcttcgagggtgactgttgatgtgtgcagaaggtccctggttcgcgcccgggtatgggcgaggggacggtctaaatttgtactgtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2391267 False 530 lncRNA 0.53 2 49688685 49689513
TU2391268 True 530 lncRNA 0.53 2 49688685 49689513

Neighbor

gene id symbol gene type direction distance location
LOC118944717 NA coding upstream 364819 49323013 ~ 49323866 (+)
pgr LOC100846969 coding upstream 422050 49201448 ~ 49266635 (+)
trpc6b LOC106581586 coding upstream 502572 49089883 ~ 49186113 (+)
zmp:0000001236 LOC106581583 coding upstream 914004 48633372 ~ 48774681 (+)
gab2 gab2 coding upstream 1064237 48460449 ~ 48624448 (+)
LOC110508133 fbxo40 coding downstream 776370 50465883 ~ 50476608 (+)
LOC110507254 nectin1 coding downstream 976206 50665719 ~ 50850459 (+)
LOC110508131 LOC106613338 coding downstream 1784007 51473520 ~ 51510450 (+)
G2090407 NA non-coding upstream 31707 49608276 ~ 49656978 (+)
G2090424 NA non-coding upstream 45746 49641294 ~ 49642939 (+)
G2090406 NA non-coding upstream 80839 49607534 ~ 49607846 (+)
G2090398 NA non-coding upstream 91225 49597251 ~ 49597460 (+)
G2090199 NA non-coding upstream 121152 49533693 ~ 49567533 (+)
G2090479 NA non-coding downstream 39696 49729209 ~ 49730944 (+)
G2090497 NA non-coding downstream 67144 49756657 ~ 49772798 (+)
G2090499 NA non-coding downstream 68429 49757942 ~ 49758816 (+)
G2090501 NA non-coding downstream 75494 49765007 ~ 49765533 (+)
G2090508 NA non-coding downstream 92588 49782101 ~ 49788805 (+)
G2090103 NA other upstream 354502 49333447 ~ 49334183 (+)
G2090091 LOC106581584 other upstream 372459 49312743 ~ 49316226 (+)
G2089935 NA other upstream 629790 49058005 ~ 49058895 (+)
G2089906 NA other upstream 761393 48926975 ~ 48927292 (+)
G2090638 NA other downstream 392550 50082063 ~ 50087691 (+)
G2091093 NA other downstream 662855 50352368 ~ 50353167 (+)
G2091895 NA other downstream 1680251 51369764 ~ 51370763 (+)
G2091960 NA other downstream 1780375 51469888 ~ 51470391 (+)

Expression


Co-expression Network