G2090479


Basic Information

Item Value
gene id G2090479
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 49729209 ~ 49730944 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2391299
acttcatagacctgtataatgtacttcatagacctgtataatgtacttcatagacctgcataatgaacttcatagacctgtataatgtacttcatagacctgcataatgAACTTCATAATGaacttcatagacctgcataatgtacttcatagacctATATAATGTACTTCATACACCTGtataatgtacttcatagacctgtATAATGTAGttcatagacctgcataatgtacttcatagacctgcataatgtacttcatagacctgcataatgtacttcatagacctgcataatgaacttcatagacctgtataatgaacttcatagacctgtataatgtacttcatagacctgcataatgaacttcatagacctgcataacatacttcatagacctgtATAATGTACTTCAAAATGaacttcatagacctgcataatgtacttcatagacctgcataacGTACTTCACAGACCtgcataatgtacttcatagacctgcataatgaacttcatagacctgcataatgtacttcatagacctgtATAATGTAGTTCATAGACATGCAAAATatacttcatagacctgcataatgtacttcatagacctgtataatgaacttcatagacctgcataatgtacttcatagaccGGCATAATATACTTCATAGACCTGTATAATGaacttcatagacctgcataatgtacttcatagacctgcatgATGAACTTCATATACCTGTataatgtacttttaatgtactttatagacctgcataatgtacttcatagacctgtATAATGTACTTAataatgtacttcatagacctgcataatgtacttcataatgtacttcatagacctgtgtaatgt
>TU2391297
gtataatgaacttcatagacctgcataatgaacttcatagacctgtataatgtacttcatagacctgcataatgAACTTCGTAATGaacttcatagacctgcataatgtacttcatagacctatataatgtacttcatagacctgtataatgtacttcatagacctgtATAACGTAGttcatagacctgcataatgtacttcatagacctgcataatgtacttcatagacctagataatgtacttcatagacctgcataatgaacttcatagacctgtataatgaacttcatagacctgtataatgtacttcatagacctgcataatgaacttcatagacctgcataacgtacttcatagacctgtataacgtacttcatagacctgcATAATGTACTTCAAAATGaacttcatagacctgcataatgtacttcatagacctgcataacGTACTTCACAGACCtgcataatgtacttcatagacctgcataatgaacttcatagacctgcataatgtacttcatagacctgtATAATGTAGTTCATAGACATGCAAAATatacttcatagacctgcataatgtacttcatagacctgtataatgaacttcatagacctgcataatgtacttcatagaccGGCATAATATACTTCATAGACCTGTATAATGaacttcatagacctgcataatgtacttcatagacctgcatgATGAACTTCATATACCTGTataatgtacttttaatgtactttatagacctgcataatgtacttcatagacctgtATAATGTACTTAataatgtacttcatagacctgcataatgtacttcataatgtacttcatagacctgtgtaatgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2391299 False 873 lncRNA 0.34 2 49729209 49730944
TU2391297 True 860 lncRNA 0.34 2 49729896 49730944

Neighbor

gene id symbol gene type direction distance location
LOC118944717 NA coding upstream 405343 49323013 ~ 49323866 (+)
pgr LOC100846969 coding upstream 462574 49201448 ~ 49266635 (+)
trpc6b LOC106581586 coding upstream 543096 49089883 ~ 49186113 (+)
zmp:0000001236 LOC106581583 coding upstream 954528 48633372 ~ 48774681 (+)
gab2 gab2 coding upstream 1104761 48460449 ~ 48624448 (+)
LOC110508133 fbxo40 coding downstream 734939 50465883 ~ 50476608 (+)
LOC110507254 nectin1 coding downstream 934775 50665719 ~ 50850459 (+)
LOC110508131 LOC106613338 coding downstream 1742576 51473520 ~ 51510450 (+)
G2090454 NA non-coding upstream 39696 49688685 ~ 49689513 (+)
G2090407 NA non-coding upstream 72231 49608276 ~ 49656978 (+)
G2090424 NA non-coding upstream 86270 49641294 ~ 49642939 (+)
G2090406 NA non-coding upstream 121363 49607534 ~ 49607846 (+)
G2090398 NA non-coding upstream 131749 49597251 ~ 49597460 (+)
G2090497 NA non-coding downstream 25713 49756657 ~ 49772798 (+)
G2090499 NA non-coding downstream 26998 49757942 ~ 49758816 (+)
G2090501 NA non-coding downstream 34063 49765007 ~ 49765533 (+)
G2090508 NA non-coding downstream 51157 49782101 ~ 49788805 (+)
G2090526 NA non-coding downstream 97173 49828117 ~ 49828635 (+)
G2090103 NA other upstream 395026 49333447 ~ 49334183 (+)
G2090091 LOC106581584 other upstream 412983 49312743 ~ 49316226 (+)
G2089935 NA other upstream 670314 49058005 ~ 49058895 (+)
G2089906 NA other upstream 801917 48926975 ~ 48927292 (+)
G2090638 NA other downstream 351119 50082063 ~ 50087691 (+)
G2091093 NA other downstream 621424 50352368 ~ 50353167 (+)
G2091895 NA other downstream 1638820 51369764 ~ 51370763 (+)
G2091960 NA other downstream 1738944 51469888 ~ 51470391 (+)

Expression


Co-expression Network