G2090548


Basic Information

Item Value
gene id G2090548
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 49878133 ~ 49883194 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2391394
gtgtatttatccctgtgtttcctgtctatctgtaccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtgccagtgtatttatccctgtgtttcctgtctctctgtgtcagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtctctctgtgtcagtgtatttatccctgtgtttcctgtctctctgtgtcagtgtatttatccctgtgtttcctgtctctctgtgtcagtgtatttatccctgtgtttcctgtctcactGTACCAGTGtagttatccctgtgtttcctatcTCTCTGTACCTGTGTATTGTCATGACGTTGCTCTCCTTGGGTACAGCGAGCAAcatccccctctttctgtctcctacACTCAGGCTGCTCCAACCTCAGgccgtaaattcctggaggagattatctcctcatggccacagtaaagagagagagtgagttttcatagagagaacaaaggaatttcatCCACCTCACAGAATTTGAGGttcgaacaacatttatgttctggagaggTAAAAAAGTTGGGTGaggaatccagctacgaactggtccatttggTACAATTACgtgaaactcatggg
>TU2391396
gtgtatttatccctgtgtttcctgtctatctgtaccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtgccagtgtatttatccctgtgtttcctgtctctctgtgtcagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgttccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgttccagtgtatttatccctgtgcttcctgtctctctgtaccagtgtatttaaccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttccggtctctctgtcccagtgcatgtatccctgtgtttcctgtctctctgtgccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtattgttccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtgtatttatccctgtgtttcctgtctctctgtgccagtttgtcttgtatgttccaagtcaaccagcattttccCCATAATCCTGCCTTTGCAATTCTCTTtatctagtcctcccggttttgacccttgcctgttctggactccgtacccgcctgcctgccttgacTACGAGCCATTCTGCTACTCTGTACCTCCtgaactctgatctggttttgattTTTTTGCCAGAAGAGTACCCTCCCCCC

Function

NR:

description
PREDICTED: proline-rich protein 36-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2391394 False 689 lncRNA 0.44 2 49878133 49879128
TU2391396 True 831 lncRNA 0.46 2 49878133 49883194

Neighbor

gene id symbol gene type direction distance location
LOC118944717 NA coding upstream 554267 49323013 ~ 49323866 (+)
pgr LOC100846969 coding upstream 611498 49201448 ~ 49266635 (+)
trpc6b LOC106581586 coding upstream 692020 49089883 ~ 49186113 (+)
zmp:0000001236 LOC106581583 coding upstream 1103452 48633372 ~ 48774681 (+)
gab2 gab2 coding upstream 1253685 48460449 ~ 48624448 (+)
LOC110508133 fbxo40 coding downstream 582689 50465883 ~ 50476608 (+)
LOC110507254 nectin1 coding downstream 782525 50665719 ~ 50850459 (+)
LOC110508131 LOC106613338 coding downstream 1590326 51473520 ~ 51510450 (+)
G2090529 NA non-coding upstream 37416 49840231 ~ 49840717 (+)
G2090526 NA non-coding upstream 49498 49828117 ~ 49828635 (+)
G2090508 NA non-coding upstream 89328 49782101 ~ 49788805 (+)
G2090497 NA non-coding upstream 105335 49756657 ~ 49772798 (+)
G2090551 NA non-coding downstream 6101 49889295 ~ 49895683 (+)
G2090562 NA non-coding downstream 29755 49912949 ~ 49913869 (+)
G2090582 NA non-coding downstream 93344 49976538 ~ 49978058 (+)
G2090592 NA non-coding downstream 109056 49992250 ~ 49993690 (+)
G2090618 NA non-coding downstream 160085 50043279 ~ 50044309 (+)
G2090103 NA other upstream 543950 49333447 ~ 49334183 (+)
G2090091 LOC106581584 other upstream 561907 49312743 ~ 49316226 (+)
G2089935 NA other upstream 819238 49058005 ~ 49058895 (+)
G2090638 NA other downstream 198869 50082063 ~ 50087691 (+)
G2091093 NA other downstream 469174 50352368 ~ 50353167 (+)
G2091895 NA other downstream 1486570 51369764 ~ 51370763 (+)
G2091960 NA other downstream 1586694 51469888 ~ 51470391 (+)

Expression


Co-expression Network