Gene
RNA
| Item | Value |
|---|---|
| gene id | G2090551 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 49889295 ~ 49895683 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2391401 | False | 314 | lncRNA | 0.51 | 2 | 49889295 | 49895683 |
| TU2391402 | True | 237 | lncRNA | 0.51 | 2 | 49889295 | 49892756 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944717 | NA | coding | upstream | 565429 | 49323013 ~ 49323866 (+) |
| pgr | LOC100846969 | coding | upstream | 622660 | 49201448 ~ 49266635 (+) |
| trpc6b | LOC106581586 | coding | upstream | 703182 | 49089883 ~ 49186113 (+) |
| zmp:0000001236 | LOC106581583 | coding | upstream | 1114614 | 48633372 ~ 48774681 (+) |
| gab2 | gab2 | coding | upstream | 1264847 | 48460449 ~ 48624448 (+) |
| LOC110508133 | fbxo40 | coding | downstream | 570200 | 50465883 ~ 50476608 (+) |
| LOC110507254 | nectin1 | coding | downstream | 770036 | 50665719 ~ 50850459 (+) |
| LOC110508131 | LOC106613338 | coding | downstream | 1577837 | 51473520 ~ 51510450 (+) |
| G2090548 | NA | non-coding | upstream | 6101 | 49878133 ~ 49883194 (+) |
| G2090529 | NA | non-coding | upstream | 48578 | 49840231 ~ 49840717 (+) |
| G2090526 | NA | non-coding | upstream | 60660 | 49828117 ~ 49828635 (+) |
| G2090508 | NA | non-coding | upstream | 100490 | 49782101 ~ 49788805 (+) |
| G2090501 | NA | non-coding | upstream | 123762 | 49765007 ~ 49765533 (+) |
| G2090562 | NA | non-coding | downstream | 17266 | 49912949 ~ 49913869 (+) |
| G2090582 | NA | non-coding | downstream | 80855 | 49976538 ~ 49978058 (+) |
| G2090592 | NA | non-coding | downstream | 96567 | 49992250 ~ 49993690 (+) |
| G2090618 | NA | non-coding | downstream | 147596 | 50043279 ~ 50044309 (+) |
| G2090622 | NA | non-coding | downstream | 155662 | 50051345 ~ 50051867 (+) |
| G2090103 | NA | other | upstream | 555112 | 49333447 ~ 49334183 (+) |
| G2090091 | LOC106581584 | other | upstream | 573069 | 49312743 ~ 49316226 (+) |
| G2089935 | NA | other | upstream | 830400 | 49058005 ~ 49058895 (+) |
| G2090638 | NA | other | downstream | 186380 | 50082063 ~ 50087691 (+) |
| G2091093 | NA | other | downstream | 456685 | 50352368 ~ 50353167 (+) |
| G2091895 | NA | other | downstream | 1474081 | 51369764 ~ 51370763 (+) |
| G2091960 | NA | other | downstream | 1574205 | 51469888 ~ 51470391 (+) |
