G2091182


Basic Information

Item Value
gene id G2091182
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 50482581 ~ 50486984 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2392133
ctttcACCTTCAATAAAACGTAAACGTTTATTAATTAATTTCTCAAGACAAAATGTAATGCATGCACAAGTGATACAAATAAATGTATCTGGTTTGCCAGTGTTGGGGTGGTAAGTCTTGTCCTTTGACTACTGTGTCTCTGACACCTCCGGGTTGCCTGGCTGAACCGTTCCAGAGCTATGGGTAGATCCCCAGCCTCTGCTGCTGCAACcccctccatctccagctctttgacctgctGTAGCAGCCCAACCTCAAAGCCACTGTCTGGAGGAGACAGATAAACAGTGTTCTAATGGAATGACAGGTGCATGGTATAGAAGACTGGACAACAATAACAGTGGAGTCACCAGACATTCATACACACAGGAATAATCCAGTTTTGAAATAACTTTAAGAGGAATATAAATGCTCTGGAGTCAGAATAAACCACATATGTTACAAAATGATGAACATGAAACAGCACATCACCCCAACACACGACAACCACCAACACAcgacaaccaccaacacacacGACAATCACCAACACACAagacaaccaccaacacacatgataactactaacacacgacaaccaccaacacacaagacaaccaccaacacatgacaaccaccaacacacaagacaaccaccaacacacgacaaccaccaacacacatgataactactaacacacacgacaaccaccaacacacaagacaaccaccaacacatgacaaccaccaacacacaagacaaccaccaacacacatGATAACTACAAACATACACGACAACCACCAACACACgacaaccaccaacacacatGATAAATACTAACACACACGACAACCACCAACACGcgacaaccaccaacacacatGATAACTACTAACACAAACAACAAACACCAACACACGACAAACCAACACAcgacaaccaccaacacacatgataactactaacacacacgacaaccaccaacacacgacaac

Function

NR:

description
PREDICTED: tetratricopeptide repeat protein 36

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2392133 True 978 lncRNA 0.44 3 50482581 50486984

Neighbor

gene id symbol gene type direction distance location
LOC110508133 fbxo40 coding upstream 5973 50465883 ~ 50476608 (+)
LOC118944717 NA coding upstream 1158715 49323013 ~ 49323866 (+)
pgr LOC100846969 coding upstream 1215946 49201448 ~ 49266635 (+)
trpc6b LOC106581586 coding upstream 1296468 49089883 ~ 49186113 (+)
zmp:0000001236 LOC106581583 coding upstream 1707900 48633372 ~ 48774681 (+)
LOC110507254 nectin1 coding downstream 178735 50665719 ~ 50850459 (+)
LOC110508131 LOC106613338 coding downstream 986536 51473520 ~ 51510450 (+)
G2091153 NA non-coding upstream 53512 50425243 ~ 50429069 (+)
G2091135 NA non-coding upstream 85468 50393672 ~ 50397113 (+)
G2091131 NA non-coding upstream 90839 50391464 ~ 50391742 (+)
G2091098 NA non-coding upstream 123044 50359327 ~ 50359537 (+)
G2091092 NA non-coding upstream 131510 50350782 ~ 50351071 (+)
G2091183 NA non-coding downstream 979 50487963 ~ 50490523 (+)
G2091255 NA non-coding downstream 31360 50518344 ~ 50518653 (+)
G2091276 NA non-coding downstream 52057 50539041 ~ 50539315 (+)
G2091308 NA non-coding downstream 93775 50580759 ~ 50581631 (+)
G2091323 NA non-coding downstream 112324 50599308 ~ 50599510 (+)
G2091093 NA other upstream 129414 50352368 ~ 50353167 (+)
G2090638 NA other upstream 394890 50082063 ~ 50087691 (+)
G2090508 NA other upstream 693776 49782101 ~ 49788805 (+)
G2090103 NA other upstream 1148398 49333447 ~ 49334183 (+)
G2091895 NA other downstream 882780 51369764 ~ 51370763 (+)
G2091960 NA other downstream 982904 51469888 ~ 51470391 (+)

Expression


Co-expression Network