G2091183


Basic Information

Item Value
gene id G2091183
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 50487963 ~ 50490523 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2392134
ccaacacacatgataactactaacacacacgacaaccaccaacacacgacaaccaccaacacacaagacaaccaccaacacacgacaaccaccaacacacaagacaaccaccaacacacgacaaccaccaacacacatgataactactaacacacacgacaaccaccaacacacgacaaccaccaacacacgacaaccaccaacacacacaacaaccGCCAACACATgacaaccaccaacacacacgataacaactaacacacacaacaaccaccaacacacgacaaccaccaacacacacgataacaactaacacacacaacaaccaccaacacacacaacaaccaccaacacacaagataacaactaacacacacaacaaccaccaacacacacaacaaccacCAACACACACGATAACAACTAACACACACAACAACCACCAACAAAcgacaaccaccaacacacatgctaactactaacacacacaacaaccaccaacacacacaacaaacaccaaCACACGACAAACCAACACACGACAACCACCAACACACGACAACCACCAACACATGACCACCACCAACACACACGATAACTactaacacacacaacaaacGCCAACACACGACAAACCAACACACGACAACCACCAACACACGACAACCACCAACACATGACCACCACCAACACACACGATAACTACTAACACACACAACAACCACCAACTCACACAACAAccaccaacacacacaacaaccacaaacacacacaacaaccaccaacacacacaacaaccaccaacacacacaacaaccacaaacacacacaacaaacaccaacacacacaacaaccaccaacacacacaacaaccacaaacacacacaacaaccaccaacacacacagcaaccaccaacacacacaacaaccaccaacacacacaacaaacaccaaCACACATGATAACTACTAACACACATAACTACTAACACACATAACTACAAACACACATGATAACTACTAAAACACATGATAACTACTAAAACACATGATAACTACTAACACACATGATAACCACTAACATACATGATAACTACTAACCCACATAACTACTAATACACATGATAACTACTAACACACATGATAACTACTAACACACATGATAACTACTAACATACATGATAACTACTAACATACATGATAACTACTAACATACATGATAACTACTAACACACATAACTACTAATACACATGATAACTACTAACACTTAACTACTAACACACATGATAACTACTAACACACATGATAACTACTAACACACATGATAACTACTAACACACATGATAACTACTAACACACATAACTACTAACACACATAATAACTACTAACACATAACTACTAACACACATGATAACTACTAACACACATGATAACTACTAACAACTAAATCCATTGTAAAAAAAGGTTTTCACCATCGTCTGTCAGTTCCTCCTCTTGGTTTAACCCAGGGACGTCTCCTGGCGGGCTGGTGGGGTTAAAGATGGCCTGAAGTACAGCTCTGTCATGGGCTGAAGCCATTGTTCCAGATGGGTGGAAAGCAGAAGGCAGAGTAGTGGAATTGCGATCCTAAGTGGTGGGAGAGGGGTGCATTTTCTCCTCAAATTCTCACAGATTTCTCCTCAACCAATCGAAGCAGGGGGTGGAAACAGGCAGACTTTGA

Function

NR:

description
LOW QUALITY PROTEIN: tetratricopeptide repeat protein 36

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2392134 True 1724 lncRNA 0.42 4 50487963 50490523

Neighbor

gene id symbol gene type direction distance location
LOC110508133 fbxo40 coding upstream 11355 50465883 ~ 50476608 (+)
LOC118944717 NA coding upstream 1164097 49323013 ~ 49323866 (+)
pgr LOC100846969 coding upstream 1221328 49201448 ~ 49266635 (+)
trpc6b LOC106581586 coding upstream 1301850 49089883 ~ 49186113 (+)
zmp:0000001236 LOC106581583 coding upstream 1713282 48633372 ~ 48774681 (+)
LOC110507254 nectin1 coding downstream 175196 50665719 ~ 50850459 (+)
LOC110508131 LOC106613338 coding downstream 982997 51473520 ~ 51510450 (+)
G2091182 NA non-coding upstream 979 50482581 ~ 50486984 (+)
G2091153 NA non-coding upstream 58894 50425243 ~ 50429069 (+)
G2091135 NA non-coding upstream 90850 50393672 ~ 50397113 (+)
G2091131 NA non-coding upstream 96221 50391464 ~ 50391742 (+)
G2091098 NA non-coding upstream 128426 50359327 ~ 50359537 (+)
G2091255 NA non-coding downstream 27821 50518344 ~ 50518653 (+)
G2091276 NA non-coding downstream 48518 50539041 ~ 50539315 (+)
G2091308 NA non-coding downstream 90236 50580759 ~ 50581631 (+)
G2091323 NA non-coding downstream 108785 50599308 ~ 50599510 (+)
G2091326 NA non-coding downstream 109737 50600260 ~ 50600598 (+)
G2091093 NA other upstream 134796 50352368 ~ 50353167 (+)
G2090638 NA other upstream 400272 50082063 ~ 50087691 (+)
G2090508 NA other upstream 699158 49782101 ~ 49788805 (+)
G2090103 NA other upstream 1153780 49333447 ~ 49334183 (+)
G2091895 NA other downstream 879241 51369764 ~ 51370763 (+)
G2091960 NA other downstream 979365 51469888 ~ 51470391 (+)

Expression


Co-expression Network