G2091865


Basic Information

Item Value
gene id G2091865
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 51278406 ~ 51279940 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2392959
AgtccatacagtttattaggtaatgataataataacatGTAGCTGTTGGGTTAGCTGTGCACAGCAGTCACTGTTTTACATAACAACATTGTTCTCACAGCATATGACATTAATTTGAAACAAATGCCGTTATTTGTCTAGTAAATAGAAAATCAACAGCACTACTCACTAAACAATCCCCCAAAAGCTGAATAGAAGACAGTGACATAGTGTGTGAGGAAaactatactaactatataaGTGCTGCAATGTTATTGTTTGGACCAGtcccctgcagacagacagagagatgactAAACAAGCTTTATACTGTACCTAATGGCAACAGCTGTCAAATACATGAACATAGATTAGTGTACTTGAACATATTCAACATGTGTCTATGTATGTCTGTCTTGATTTGTTAAAACCCCTGCTAAATAGCTCCATGTAAAAGCAAGTCAAATATAGTAAGGCAGCTTTCAGAGCCATGTATAATCAGATCAGTGTGTAattagcagagtagagtagagtagattagAGTAGAGCAGGCCACTAGCTTTTATTTGACATCACTCAGCAAAACACATTTAGATCCAATTGGAAAAAGGGGACAATGTAGGGGACTAGAAGACAATGTAGGGGACTAGGTGACAATGTAGGGGAATAGGTGACAACGCAGGGTGGCAAAGTAGGGTACAACGTAGGGGACTACGGACAACGTAGGGGACTAGGGGACAACGTAGGGGACTACGTGGGgggcagtagtgtgtgtgtcagctgtcAGAGGGTTATACTCTCAGCTCCAAAGGGTGGGTTAATGTAGTCTCTCTATACATCAGATCCTTTCTGCCTGCGCTTGGAGGGGGGCACCAGGCGTGCTGGCAGCTCGGGTGGCAGACCATGCCCCTCTAACTTCACCTCGATCAGGTGGCTGGCCAGGGCAAACTCCTCGTCATCCAGCATGCCATCTCGGTCCACATCCGACAGCTTCCAGATCCTCCCCAGGACGGAGTTTGGCAGCCGGGTGCTCACCATCCAGTCCCTGGCCTTGGTGCCACTCAGCTTGCCCTCGTTGGGCGCCAGGTTGTAGAAGATCTCGTCATATTTGGGCTTATCCTTGGTCACCACCCAGGCCATCTCGCCCCCATCCTCGCCCTCCTTCTCCATGTCACCGAATGGGTCGTTCACCACGAAGGGCCCGGCACGGGTTCCCAGGAAGGCCCCCCCCTGTACCCCTGGCTGCTCCCCCAGGTTGATCTCCTCCTGGCGCAGCAGGGGCATCAGCTTGGCGATGTCGGATGCCAGCAGCTCGTCCAGAGCAGCCATCAGGGACGGTTTCAGGGGCTTGAACTTACTGAAGTCATGGGTCAACAGCTGC
>TU2392961
AgtccatacagtttattaggtaatgataataataacatGTAGCTGTTGGGTTAGCTGTGCACAGCAGTCACTGTTTTACATAACAACATTGTTCTCACAGCATATGACATTAATTTGAAACAAATGCCGTTATTTGTCTAGTAAATAGAAAATCAACAGCACTACTCACTAAACAATCCCCCAAAAGCTGAATAGAAGACAGTGACATAGTGTGTGAGGAAaactatactaactatataaGTGCTGCAATGTTATTGTTTGGACCAGtcccctgcagacagacagagagatgactAAACAAGCTTTATACTGTACCTAATGGCAACAGCTGTCAAATACATGAACATAGATTAGTGTACTTGAACATATTCAACATGTGTCTATGTATGTCTGTCTTGATTTGTTAAAACCCCTGCTAAATAGCTCCATGTAAAAGCAAGTCAAATATAGTAAGGCAGCTTTCAGAGCCATGTATAATCAGATCAGTGTGTAattagcagagtagagtagagtagattagAGTAGAGCAGGCCACTAGCTTTTATTTGACATCACTCAGCAAAACACATTTAGATCCAATTGGAAAAAGGGGACAATGTAGGGGACTAGAAGACAATGTAGGGGACTAGGTGACAATGTAGGGGACTAGGTGACAACGCAGGGTGGCAAAGTAGGGTACAACGTAGGGGACTACGGACAACGTAGGGGACTAGGGGACAACGTAGGGGACTACGTGGGgggcagtagtgtgtgtgtcagctgtcAGAGGGTTATACTCTCAGCTCCAAAGGGTGGGTTAATGTAGTCTCTCTATACATCAGATCCTTTCTGCCTGCGCTTGGAGGGGGGCACCAGGCGTGCTGGCAGCTCGGGTGGCAGACCATGCCCCTCTAACTTCACCTCGATCAGGTGGCTGGCCAGGGCAAACTCCTCGTCATCCAGCATGCCATCTCGGTCCACATCCGACAGCTTCCAGATCCTCCCCAGGACGGAGTTTGGCAGCCGGGTGCTCACCATCCAGTCCCTGGCCTTGGTGCCACTCAGCTTGCCCTCGTTGGGCGCCAGGTTGTAGAAGATCTCGTCATATTTGGGCTTATCCTTGGTCACCACCCAGGCCATCTCGCCCCCATCCTCGCCCTCCTTCTCCATGTCACCGAATGGGTCGTTCACCACGAAGGGCCCGGCACGGGTTCCCAGGAAGGCCCCCCCCTGTACCCCTGGCTGCTCCCCCAGGTTGATCTCCTCCTGGCGCAGCAGGGGCATCAGCTTGGCGATGTCGGATGCCAGCAGCTCGTCCAGAGCAGCCATCAGGGACGGTTTCAGGGGCTTGAACTTACTGAAGTCATGGGTCAACAGCTGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2392959 False 1360 lncRNA 0.49 2 51278406 51279940
TU2392961 True 1360 lncRNA 0.49 2 51278406 51279940

Neighbor

gene id symbol gene type direction distance location
LOC110507254 nectin1 coding upstream 427947 50665719 ~ 50850459 (+)
LOC110508133 fbxo40 coding upstream 801798 50465883 ~ 50476608 (+)
LOC118944717 NA coding upstream 1954540 49323013 ~ 49323866 (+)
pgr LOC100846969 coding upstream 2011771 49201448 ~ 49266635 (+)
trpc6b LOC106581586 coding upstream 2092293 49089883 ~ 49186113 (+)
LOC110508131 LOC106613338 coding downstream 193580 51473520 ~ 51510450 (+)
G2091817 NA non-coding upstream 27036 51146128 ~ 51251370 (+)
G2091808 NA non-coding upstream 158321 51119733 ~ 51120085 (+)
G2091800 NA non-coding upstream 166233 51111731 ~ 51112173 (+)
G2091801 NA non-coding upstream 167220 51110765 ~ 51111186 (+)
G2091588 NA non-coding upstream 185834 51087263 ~ 51092572 (+)
G2091883 NA non-coding downstream 35950 51315890 ~ 51316464 (+)
G2091898 NA non-coding downstream 80867 51360807 ~ 51361385 (+)
G2091900 NA non-coding downstream 82731 51362671 ~ 51362897 (+)
G2091901 NA non-coding downstream 83200 51363140 ~ 51363361 (+)
G2091894 LOC106581600 non-coding downstream 84260 51364200 ~ 51369536 (+)
G2091093 NA other upstream 925239 50352368 ~ 50353167 (+)
G2090638 NA other upstream 1190715 50082063 ~ 50087691 (+)
G2090508 NA other upstream 1489601 49782101 ~ 49788805 (+)
G2090103 NA other upstream 1944223 49333447 ~ 49334183 (+)
G2091895 NA other downstream 89824 51369764 ~ 51370763 (+)
G2091960 NA other downstream 189948 51469888 ~ 51470391 (+)

Expression


Co-expression Network