G2091900


Basic Information

Item Value
gene id G2091900
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 51362671 ~ 51362897 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2393000
cttggccttgtgctgttgactgtgcccaaaaatgcttgtaccatgttttgtgctgctaccattttggtgttatgttgtgttgctgccatgttgtgttgctactgtaccatgctgtgttgtcatgtgttgctgccttgctatgttgtcttaggtctcgatgtagtgttgtctctcattgtgatgtgtattttgtcctatatttatattgcatttattttttatcccag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2393000 True 227 lncRNA 0.41 1 51362671 51362897

Neighbor

gene id symbol gene type direction distance location
LOC110507254 nectin1 coding upstream 512212 50665719 ~ 50850459 (+)
LOC110508133 fbxo40 coding upstream 886063 50465883 ~ 50476608 (+)
LOC118944717 NA coding upstream 2038805 49323013 ~ 49323866 (+)
pgr LOC100846969 coding upstream 2096036 49201448 ~ 49266635 (+)
trpc6b LOC106581586 coding upstream 2176558 49089883 ~ 49186113 (+)
LOC110508131 LOC106613338 coding downstream 110623 51473520 ~ 51510450 (+)
G2091898 NA non-coding upstream 1286 51360807 ~ 51361385 (+)
G2091883 NA non-coding upstream 46207 51315890 ~ 51316464 (+)
G2091865 NA non-coding upstream 82731 51278406 ~ 51279940 (+)
G2091817 NA non-coding upstream 111301 51146128 ~ 51251370 (+)
G2091808 NA non-coding upstream 242586 51119733 ~ 51120085 (+)
G2091901 NA non-coding downstream 243 51363140 ~ 51363361 (+)
G2091894 LOC106581600 non-coding downstream 1303 51364200 ~ 51369536 (+)
G2091902 NA non-coding downstream 8637 51371534 ~ 51371801 (+)
G2091906 NA non-coding downstream 17606 51380503 ~ 51380967 (+)
G2091908 NA non-coding downstream 20369 51383266 ~ 51383666 (+)
G2091093 NA other upstream 1009504 50352368 ~ 50353167 (+)
G2090638 NA other upstream 1274980 50082063 ~ 50087691 (+)
G2090508 NA other upstream 1573866 49782101 ~ 49788805 (+)
G2090103 NA other upstream 2028488 49333447 ~ 49334183 (+)
G2091895 NA other downstream 6867 51369764 ~ 51370763 (+)
G2091960 NA other downstream 106991 51469888 ~ 51470391 (+)

Expression


Co-expression Network