G2091894 (LOC106581600)


Basic Information

Item Value
gene id G2091894
gene name LOC106581600
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 51364200 ~ 51369536 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2392993
atttttttaaaagtgtCATTAtacacaataaatacaatacaaaattaaTCTAATACTATACTTCAAATTCTCTTTTTTTGTACATTATTGTTCATTTGTCCATGTTTCTGCGTTTGAATTGTCCAACAGGCTTTGAagatggggaacagaggggcgaaggagagaataagatagggatggggaacagtggggcgaaggagagaataagatatggatggggaacagaggggcgaaggagagaataagatatggatggggaacagaggggcgaaggagagaataagatagggatggggaacagaggggcgaaggagagaataagatagggatggggaACAGAGGGGCGAAGGAGAGAATAAGATagggatggggaacagaggggcgaaggagagaataagatagggatggggaacagaggggcgaaggagagaataagaagggatggggaacagaggggcgAAGGAGAGAATAAGATAGGGATGGGGAACAGGGACAGAGGGGCGAAGGAGAGAATAAGATAGGGATGGGGAACAGGGACAGAGGGGCGAAGGAGAGAATAAGATAGGGATGGGGAACAGGGACAGAGGGGCGAAGGAGAGAATAAGATAGGGATGGGGAACAGTGACAGAGGGGCGAAGGAGAGAATAAGATAGGGATGGGGAACAGTGACAGAGGGGCAAAGGAGAGAATAAGATAGGGATGGGGAACAGGGACAGAGGGGCGAAGGAGAGAATAAGATAGGGATGGGGAACAGGGACAGAGGGGCGAAGGAGAGAATAAGATAGGGATGGGGAACAGGGACAGAGGGGCGAAGGAGAGAATAAGATAGGGATGGGGAACAGTGACAGAGGGGCGAAGGAGAGAATAAGATAGGGATGGGGAACAGTGACAGAGGGGCAAAGGAGAGAATAAGATAGGGATGGGGAACAGGGACAGAGGGGCGAAGGAGAGAATACGATAGGGATGGGGAACAGGGACAGAGGGGCGAAGGAGAGAATAAGAGATTTGATAAATGTGGCcatgttaactgaaatgcatccTAGCCTACTGAACGTCAGCCATGGTCAGGACAACCAGAGGACATGTTTTAACATGTAAAAGTGATTTCATAATTACATGTTTCATTGTCATTACAGTAATAGGGTTCTTAAAGAGAGCACCAGCCTCAACAGTCAACCAGAAAGTCAACCAACCACCTCAACATTTAACCATACTACAACATGTATTTGAAAGAAACACAACCTAACCATCTAGCTAAGAAGAATTGAACAGCTGGAACCAGAAAGTGTATTTGTGGTGATGATAGAAGTCAGAATATGGAAAAAGAGACGTGGATCTGTAGTGATGAAGAGATCGCTATAACAAGCCTCTCCTCCGTGTGTGGTTTACCTACTGAAGTAAGGCTTTAGGGAGTTTTATGCAGTCTTGCCTTGATTATATTCAGTAGAGCAAACatttagtcacagaaaaacaaatCTCTTATTATTGGACAAGTTCCTGTAGTTTTCTCCTGTTTTAtacctactgaacatgacccaggtctTATTTGTtatacagacaggcaggcagcagctATAACATGATGACTAAGGAATGGAATACAGTGGGAATGAATAAGGAAAACCTTCAATAATACAAAAGAACTGGAGACAAATGAATCAAACTGATGATTGAGCGTAGTTGAGAGAGCAGAGGGTACTGCCACAGAGTAAAGCATACCTTTTTACAGAGAGtcatcaccatccatccatccagtgaCTGTGAGCATTGTGTCATGTTGTAAAGTAAACAACATTCAGATGGACAAACAAGGTCAACTGAGCTCGTCAGAGCAGTGAGAGTTATTCCGCTCTCCTCTCTTCAGTCCCAACTGTTGTATGTGTTATCTGCTGTGAGTCTGTGGCACCAGTCCTCTGCCTCCAACCTGAGAGTGATGGGCCAGAGAGGATGAAGATGAAGAAGAGACTGAGGGTCTGTATGTATGTGAGGAGGGCTGGGGGGCCGTGGGTCGctggctgtggtggtggtgtggcctGATGGAGCCCCCTTTGGCTCTGCGCGGTGTGGGCCCCTGGGCCTGGCCCTGCAAGTTGAGGATGGTGTCGATGGCACACTGCAGGTGCTCGTTAAGAGACTCATCGTGTGGCGGGGAGCCGGAGGAGAAGGAGGCGTTGTCCATGACAGGAGAGTCTGACTTACAGCGCTTAGCAGGAAGTGATGAGTCTCTGTAACAAGAAGTGTCTGGCGGCGAGGAAGGGGGCCCAGGGGCATGCTGGTCCATTCTGAACGTATCACCTCCACCAGACCTCTGGTGGTTTTTACTGCTCACCCTCTTATACCTCCCCAtgtccgcccctctgtcccaatgatccccttctctccccctctcctcctctctgtctgagaGATGCTGCTGGGTGTTTGTGATGCCCTGCACTAGGccaggagaggagggataggagTTCCCCAGCCTCAGGGCCTCCCGGCTGAGCTCTGTGTGGGAGCCCCCCTCCCTGGGGctgcctcctctcttctccagctTCATGCTGGTGATCACTGTCCCctctgaggagggagagggtgaggagggagaaTTGGGGGGCGAGGGGGAGGGACGGGGGTACGGGacactgtctcctcctcctcccggtACACCCGGTCGGACGCGGGGGCTGATGTTCTCCCGGTAAGTCTTCCGTAGAGGCAGGCGGCAGGTGGTCTGAGGGGAAGTGGCCGTGGAGGCGGGGTTACGCTTGACTCCACCCACATTGTGATGTTCTAACGCTCCGTTCATCTGAGCCGTGGAGGAAGATGCGGGCGCTGTGACTCTCTGTGGGCTAGGGTTCGCCTGTGTGGTTGCTATGAAGACCATTGCTGAGGAGGCTGTGTTACAGCTAGGGGGAGGAGTCCTAATGACAGTTATAGAAGGCGGCGTGGCTAGTGCTGCTGTTTGGGCTTTAGGGAGTGCCGGCGCCGGTTGAGGTCGTGTGGTAGGGAGTGCTGGCGTCGGTTGGGGTCGTGTGGTAAGGAGTGCCGGCGTCGGTTGGGGCA

Function

NR:

description
glioma tumor suppressor candidate region gene 1 protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2392993 True 3051 lncRNA 0.51 2 51364200 51369536

Neighbor

gene id symbol gene type direction distance location
LOC110507254 nectin1 coding upstream 513741 50665719 ~ 50850459 (+)
LOC110508133 fbxo40 coding upstream 887592 50465883 ~ 50476608 (+)
LOC118944717 NA coding upstream 2040334 49323013 ~ 49323866 (+)
pgr LOC100846969 coding upstream 2097565 49201448 ~ 49266635 (+)
trpc6b LOC106581586 coding upstream 2178087 49089883 ~ 49186113 (+)
LOC110508131 LOC106613338 coding downstream 103984 51473520 ~ 51510450 (+)
G2091901 NA non-coding upstream 839 51363140 ~ 51363361 (+)
G2091900 NA non-coding upstream 1303 51362671 ~ 51362897 (+)
G2091898 NA non-coding upstream 2815 51360807 ~ 51361385 (+)
G2091883 NA non-coding upstream 47736 51315890 ~ 51316464 (+)
G2091865 NA non-coding upstream 84260 51278406 ~ 51279940 (+)
G2091902 NA non-coding downstream 1998 51371534 ~ 51371801 (+)
G2091906 NA non-coding downstream 10967 51380503 ~ 51380967 (+)
G2091908 NA non-coding downstream 13730 51383266 ~ 51383666 (+)
G2091909 NA non-coding downstream 14654 51384190 ~ 51384457 (+)
G2091911 NA non-coding downstream 31642 51401178 ~ 51404738 (+)
G2091093 NA other upstream 1011033 50352368 ~ 50353167 (+)
G2090638 NA other upstream 1276509 50082063 ~ 50087691 (+)
G2090508 NA other upstream 1575395 49782101 ~ 49788805 (+)
G2090103 NA other upstream 2030017 49333447 ~ 49334183 (+)
G2091895 NA other downstream 228 51369764 ~ 51370763 (+)
G2091960 NA other downstream 100352 51469888 ~ 51470391 (+)

Expression


Co-expression Network