dusp12 (dusp12)


Basic Information

Item Value
gene id dusp12
gene name dusp12
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 28757578 ~ 28760180 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589722.2
GTGTTCCATTTTTGTTCCCTGATTGGTTACAACTAATAACCGGACCAAACAGTTTAGCAGCCATGCATTACGTTTTTAGTTATgtttagtagctagctagctagcttggttCTTAACAACTCACTGAAATAGCACACTTCGTTTGTAAGAGGTCTTCTACCATAGAGAAATCCTGATTGCCAAGTCATGATTCAGGTAGAGACAGGAGTCTACATCGGGGCAGCATCTGACCTGAAAGATGCCCAGGACCTGACCAATGCTGGCATCACCCACATACTCACAGTGGACTCAGAGCAGCCAGCTTCACCTGATGGGCCATTTAGGATGAAGTATGTCTATTCCCTGGACGAGTCCTCCACAGACCTACTCAGCCACCTTGATGACTGCATACACTTCATATGTGATGCTTGCGAGGCATCAAAATCTGTCCTTGTGCATTGCCACGTAGGGCAAAGTCGGAGTGCGGCGGTGGTGACTGCTTACTTGATGAAATGTCATAAAATGAACTTCGGCGATGCCTATGCCAAACTCCAGCAACTTAAACCTGATGTAAAGATGAATGAGGGGTTTGTGGACCAGTTAGCACTATATGAGTCATTGGGTTGTGAAGTAGATGTCACCAGCCCCCAGTACAAGCAGTACAGACTCCAGAAACTCACAGAGAAATACCCAGAGCTTCAGAATGTCCCAAAGGAGTTGTTTGCAGTGGACCCTTACCTAAGCACCTGTTCTGAGGTGGTATACAGGTGTAAAAAATGTCGACGGACACTGTTCCGCGCTTCCAGTATCCTCAGTCACACTATTGGCAAAGGACCGACTGCTTTTGCCTATAAGAAGATGAGTAACCTACCGAGTCGGGACCAGACCCAATGTACCTCCTACTTCACTGAGCCTGTCCAGTGGATGGAACAGGCCTTGTTAGGGGTGATGGATGGACAGATCTTGTGCCCAAAGTGTAGCTCCAAGTTGGGCTCATTCAGCTGGTGTGGGGAGCAGTGTTCCTGTGGTCAATGGGTGACTCCAGCCTTCCAGATGCATAAAAACAGAGTGGATGAAATCAAACACATCAGTATAGCCACACTCAAATCATGAAAATGTAAAAATGATTCATATCTGTAATAAATTTCTCAGAATAGCTGTC
>XM_036966714.1
AGTGTTCCATTTTTGTTCCCTGATTGGTTACAACTAATAACCGGACCAAACAGTTTAGCAGCCATGCATTACGTTTTTAGTTATgtttagtagctagctagctagcttggttCTTAACAACTCACTGAAATAGCACACTTCGTTTGTAAGAGGTCTTCTACCATAGAGAAATCCTGATTGCCAAGTCATGATTCAGGTAGAGACAGGAGTCTACATCGGGGCAGCATCTGACCTGAAAGATGCCCAGGACCTGACCAATGCTGGCATCACCCACATACTCACAGTGGACTCAGAGCAGCCAGCTTCACCTGATGGGCCATTTAGGATGAACCACGTAGGGCAAAGTCGGAGTGCGGCGGTGGTGACTGCTTACTTGATGAAATGTCATAAAATGAACTTCGGCGATGCCTATGCCAAACTCCAGCAACTTAAACCTGATGTAAAGATGAATGAGGGGTTTGTGGACCAGTTAGCACTATATGAGTCATTGGGTTGTGAAGTAGATGTCACCAGCCCCCAGTACAAGCAGTACAGACTCCAGAAACTCACAGAGAAATACCCAGAGCTTCAGAATGTCCCAAAGGAGTTGTTTGCAGTGGACCCTTACCTAAGCACCTGTTCTGAGGTGGTATACAGGTGTAAAAAATGTCGACGGACACTGTTCCGCGCTTCCAGTATCCTCAGTCACACTATTGGCAAAGGACCGACTGCTTTTGCCTATAAGAAGATGAGTAACCTACCGAGTCGGGACCAGACCCAATGTACCTCCTACTTCACTGAGCCTGTCCAGTGGATGGAACAGGCCTTGTTAGGGGTGATGGATGGACAGATCTTGTGCCCAAAGTGTAGCTCCAAGTTGGGCTCATTCAGCTGGTGTGGGGAGCAGTGTTCCTGTGGTCAATGGGTGACTCCAGCCTTCCAGATGCATAAAAACAGAGTGGATGAAATCAAACACATCAGTATAGCCACACTCAAATCATGAAAATGTAAAAATGATTCATATCTGTAATAAATTTCTCAGAATAGCTGTC
>XM_021589723.2
AAGTGTTCCATTTTTGTTCCCTGATTGGTTACAACTAATAACCGGACCAAACAGTTTAGCAGCCATGCATTACGTTTTTAGTTATgtttagtagctagctagctagcttggttCTTAACAACTCACTGAAATAGCACACTTCGTTTGTCTTCTACCATAGAGAAATCCTGATTGCCAAGTCATGATTCAGGTAGAGACAGGAGTCTACATCGGGGCAGCATCTGACCTGAAAGATGCCCAGGACCTGACCAATGCTGGCATCACCCACATACTCACAGTGGACTCAGAGCAGCCAGCTTCACCTGATGGGCCATTTAGGATGAAGTATGTCTATTCCCTGGACGAGTCCTCCACAGACCTACTCAGCCACCTTGATGACTGCATACACTTCATATGTGATGCTTGCGAGGCATCAAAATCTGTCCTTGTGCATTGCCACGTAGGGCAAAGTCGGAGTGCGGCGGTGGTGACTGCTTACTTGATGAAATGTCATAAAATGAACTTCGGCGATGCCTATGCCAAACTCCAGCAACTTAAACCTGATGTAAAGATGAATGAGGGGTTTGTGGACCAGTTAGCACTATATGAGTCATTGGGTTGTGAAGTAGATGTCACCAGCCCCCAGTACAAGCAGTACAGACTCCAGAAACTCACAGAGAAATACCCAGAGCTTCAGAATGTCCCAAAGGAGTTGTTTGCAGTGGACCCTTACCTAAGCACCTGTTCTGAGGTGGTATACAGGTGTAAAAAATGTCGACGGACACTGTTCCGCGCTTCCAGTATCCTCAGTCACACTATTGGCAAAGGACCGACTGCTTTTGCCTATAAGAAGATGAGTAACCTACCGAGTCGGGACCAGACCCAATGTACCTCCTACTTCACTGAGCCTGTCCAGTGGATGGAACAGGCCTTGTTAGGGGTGATGGATGGACAGATCTTGTGCCCAAAGTGTAGCTCCAAGTTGGGCTCATTCAGCTGGTGTGGGGAGCAGTGTTCCTGTGGTCAATGGGTGACTCCAGCCTTCCAGATGCATAAAAACAGAGTGGATGAAATCAAACACATCAGTATAGCCACACTCAAATCATGAAAATGTAAAAATGATTCATATCTGTAATAAATTTCTCAGAATAGCTGTC
>XM_036966715.1
AAGTGTTCCATTTTTGTTCCCTGATTGGTTACAACTAATAACCGGACCAAACAGTTTAGCAGCCATGCATTACGTTTTTAGTTATgtttagtagctagctagctagcttggttCTTAACAACTCACTGAAATAGCACACTTCGTTTGTCTTCTACCATAGAGAAATCCTGATTGCCAAGTCATGATTCAGGTAGAGACAGGAGTCTACATCGGGGCAGCATCTGACCTGAAAGATGCCCAGGACCTGACCAATGCTGGCATCACCCACATACTCACAGTGGACTCAGAGCAGCCAGCTTCACCTGATGGGCCATTTAGGATGAACCACGTAGGGCAAAGTCGGAGTGCGGCGGTGGTGACTGCTTACTTGATGAAATGTCATAAAATGAACTTCGGCGATGCCTATGCCAAACTCCAGCAACTTAAACCTGATGTAAAGATGAATGAGGGGTTTGTGGACCAGTTAGCACTATATGAGTCATTGGGTTGTGAAGTAGATGTCACCAGCCCCCAGTACAAGCAGTACAGACTCCAGAAACTCACAGAGAAATACCCAGAGCTTCAGAATGTCCCAAAGGAGTTGTTTGCAGTGGACCCTTACCTAAGCACCTGTTCTGAGGTGGTATACAGGTGTAAAAAATGTCGACGGACACTGTTCCGCGCTTCCAGTATCCTCAGTCACACTATTGGCAAAGGACCGACTGCTTTTGCCTATAAGAAGATGAGTAACCTACCGAGTCGGGACCAGACCCAATGTACCTCCTACTTCACTGAGCCTGTCCAGTGGATGGAACAGGCCTTGTTAGGGGTGATGGATGGACAGATCTTGTGCCCAAAGTGTAGCTCCAAGTTGGGCTCATTCAGCTGGTGTGGGGAGCAGTGTTCCTGTGGTCAATGGGTGACTCCAGCCTTCCAGATGCATAAAAACAGAGTGGATGAAATCAAACACATCAGTATAGCCACACTCAAATCATGAAAATGTAAAAATGATTCATATCTGTAATAAATTTCTCAGAATAGCTGTC

Function

symbol description
dusp12 Predicted to enable protein tyrosine/serine/threonine phosphatase activity. Predicted to be involved in protein dephosphorylation. Predicted to act upstream of or within dephosphorylation. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Orthologous to human DUSP12 (dual specificity phosphatase 12).

NR:

description
dual specificity protein phosphatase 12

GO:

id name namespace
GO:0033133 positive regulation of glucokinase activity biological_process
GO:0007254 JNK cascade biological_process
GO:0035335 peptidyl-tyrosine dephosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0008138 protein tyrosine/serine/threonine phosphatase activity molecular_function
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG:

id description
K14819 DUSP12, YVH1; dual specificity phosphatase 12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589722.2 False 1141 mRNA 0.46 7 28757578 28760178
XM_036966714.1 False 1031 mRNA 0.46 7 28757578 28760179
XM_021589723.2 False 1136 mRNA 0.46 7 28757578 28760180
XM_036966715.1 True 1025 mRNA 0.46 7 28757578 28760180

Neighbor

gene id symbol gene type direction distance location
LOC110508857 LOC106599111 coding downstream 3895 28706088 ~ 28753683 (-)
LOC110508854 LOC106599121 coding downstream 117654 28632715 ~ 28639924 (-)
plppr5a LOC106599133 coding downstream 250639 28463481 ~ 28506939 (-)
LOC110508849 NA coding downstream 353685 28398505 ~ 28403893 (-)
LOC110508200 NA coding downstream 390369 28193876 ~ 28367209 (-)
LOC110508860 LOC106599100 coding upstream 57424 28817604 ~ 28840725 (-)
LOC110508863 LOC106599199 coding upstream 100545 28860725 ~ 28862370 (-)
LOC110508862 LOC106599098 coding upstream 133635 28893815 ~ 28901239 (-)
LOC110508212 LOC106599092 coding upstream 222919 28983099 ~ 29003237 (-)
LOC110508867 LOC106599198 coding upstream 265828 29026008 ~ 29028895 (-)
G2125314 NA non-coding downstream 16620 28740204 ~ 28740958 (-)
G2125272 LOC106599117 non-coding downstream 89913 28666541 ~ 28667665 (-)
G2125259 LOC106599119 non-coding downstream 116414 28640204 ~ 28641164 (-)
G2125197 NA non-coding downstream 217204 28538254 ~ 28540374 (-)
G2125143 NA non-coding downstream 299955 28457381 ~ 28457623 (-)
G2125328 NA non-coding upstream 5816 28765996 ~ 28766210 (-)
G2125336 NA non-coding upstream 8399 28768579 ~ 28768817 (-)
G2125659 NA non-coding upstream 13237 28773417 ~ 28773659 (-)
G2125660 NA non-coding upstream 13710 28773890 ~ 28775656 (-)
G2125684 NA non-coding upstream 49679 28809859 ~ 28810080 (-)
G2125290 NA other downstream 65108 28692139 ~ 28692470 (-)
G2125253 NA other downstream 71843 28627055 ~ 28685735 (-)
G2125270 agla other downstream 94152 28662708 ~ 28663426 (-)
G2125203 LOC106599130 other downstream 206064 28544941 ~ 28551514 (-)
G2122515 NA other downstream 2807125 25946733 ~ 25950453 (-)
G2125723 NA other upstream 125288 28885468 ~ 28885854 (-)
G2125813 NA other upstream 317859 29078039 ~ 29078744 (-)
LOC118944842 NA other upstream 358504 29118684 ~ 29123806 (-)
LOC110508917 LOC106598978 other upstream 1641033 30399711 ~ 30401807 (-)
G2127177 NA other upstream 1674255 30434435 ~ 30434854 (-)

Expression


Co-expression Network