LOC110508867 (LOC106599198)


Basic Information

Item Value
gene id LOC110508867
gene name LOC106599198
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 29026008 ~ 29028895 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589736.2
gcccccctcctcccctctctctcaaaaAGTAACACCCTCCTTGTTATGTGCTATGAGTCTGAGATCCCAAAAGGAGGATCCGGAGCAGTAGGTAACCATTAGCTTACTGCAGGAGAGGAGACAAGCAAAGGAGATACAGATATCCCTCCACCATGGATCTGGTCGAGGACTACGATTACTATGACAACCTAACCCTGAACTACAGCTATGAGGACTACCACACTGTGTGTGAGAAGGCTGACGTGCGCTCCTTCGCTGGACTCTTCCTCCCTGTGGTGTACTCAGTCTGTGTGGCAGTTGGGCTAGCCGGGAACTCCCTTGTGCTATCTGTCTACGCCTACCGTCTGAGGAGAACCATGATGGACGCCTTCCTAGTCCACCTGGCAGTAGccgacctcctcctcctcctaaccCTGCCCTTCTGGGCTGCAGACGCGGCGCGGGGCTGGGAGCTGGGCCTGCCTCTCTGTAAGCTAGTCTCTGCCTGCTACACCATCAACTTCACCTGCTGCATGCTGCTGCTTGCCTGTGTTAGCATAGACCGCTACCTAGCATCTATTAGAGCGGAGGGAAGGAACCAGGGAAGGCTAGGCAGGGTCTTCACCCGGGCTCACTATGGGAAGGTCTGCCTGGGGGTGTGGGCTGTGGCTTTCCTCCTGGGTCTTCCAGACCTGCTGTTCTCCACGGTGAGCAAGACCTCCGGGAGAAGGGTCTGTTTGGCTGTCTACCCGCCCAGTCTGGCCCAGGAGGTCAAGGCCTGCCTAGAGATGGTGGAGGTGCTGTTGGGATTCCTGGTGCCGCTCCTGGTGATGGCGTGGTGTTACTTCAACGTTGGGCGTGCATTGGGGCGACTCCCAGTGGAGAGTAGGGGGAGGAGGCTGAGCGCTATCCGGGTGTTACTGGTCGTGGTGGGGGTGTTCGTGGTCACCCAGCTGCCCTACAACGCTGTGAAGATATGCCGGGCGATGGACTCTACCTACACGCTGGTGACCCACTGCGGTGTGAGTAAGGCCCTGGACCGGGTGGCGCAGGTCACTGAGAGCCTGGCTCTGACCCACTGCTGTCTCAACCCACTACTCTACGCCTTCCTAGGGTCCTCCTTTAGAAAACACGTACTGAAAGCAGCCAAGGCATTTGGAGGAAGGACAAGGAGAAGGGAGGAGCAAGCTGTGGAGATGTCCTTCAACAACTCTCATTCCGCCTCACAGGAGACGAGTGCCTTCtccatatgagagagagacagata

Function

NR:

description
atypical chemokine receptor 4-like

GO: NA

KEGG:

id description
K04186 ACKR4, CCRL1, CCR11; atypical chemokine receptor 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589736.2 True 1246 mRNA 0.57 2 29026008 29028895

Neighbor

gene id symbol gene type direction distance location
LOC110508212 LOC106599092 coding downstream 22771 28983099 ~ 29003237 (-)
LOC110508862 LOC106599098 coding downstream 124769 28893815 ~ 28901239 (-)
LOC110508863 LOC106599199 coding downstream 163638 28860725 ~ 28862370 (-)
LOC110508860 LOC106599100 coding downstream 185283 28817604 ~ 28840725 (-)
dusp12 dusp12 coding downstream 265828 28757578 ~ 28760180 (-)
LOC110508868 LOC106599087 coding upstream 16671 29045566 ~ 29073745 (-)
LOC118944842 NA coding upstream 91489 29118684 ~ 29123806 (-)
LOC110508284 LOC106598767 coding upstream 109257 29138152 ~ 29141013 (-)
LOC110508873 LOC106599192 coding upstream 165703 29194598 ~ 29199181 (-)
LOC110508876 NA coding upstream 171693 29200588 ~ 29203038 (-)
G2125745 NA non-coding downstream 34944 28932659 ~ 28991064 (-)
G2125754 NA non-coding downstream 71262 28949340 ~ 28954746 (-)
G2125728 NA non-coding downstream 121550 28904201 ~ 28904458 (-)
G2125667 NA non-coding downstream 123971 28901418 ~ 28902037 (-)
G2125725 NA non-coding downstream 137937 28887337 ~ 28888071 (-)
G2125789 NA non-coding upstream 782 29029677 ~ 29029969 (-)
G2125796 NA non-coding upstream 13324 29042219 ~ 29042463 (-)
G2125808 NA non-coding upstream 45882 29074777 ~ 29075113 (-)
G2125810 LOC106599085 non-coding upstream 47159 29076054 ~ 29076542 (-)
G2125723 NA other downstream 140154 28885468 ~ 28885854 (-)
G2125290 NA other downstream 333538 28692139 ~ 28692470 (-)
G2125253 NA other downstream 340273 28627055 ~ 28685735 (-)
G2125270 agla other downstream 362582 28662708 ~ 28663426 (-)
G2125203 LOC106599130 other downstream 474494 28544941 ~ 28551514 (-)
G2125813 NA other upstream 49144 29078039 ~ 29078744 (-)
LOC110508917 LOC106598978 other upstream 1372318 30399711 ~ 30401807 (-)
G2127177 NA other upstream 1405540 30434435 ~ 30434854 (-)
G2127455 NA other upstream 1524694 30553589 ~ 30555187 (-)

Expression


Co-expression Network