LOC110508991 (LOC106598834)


Basic Information

Item Value
gene id LOC110508991
gene name LOC106598834
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 32119973 ~ 32129371 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589923.2
ACACCCTCAACTCAAGCACAGAGCACCACCTTTCCACGCTGCTGTATCGGTCGCTTCCACCCACTGAGATACACATCCACCACGCCTGCTCTTCACGTCAGTCCGCAACGTCAGATTGTGCGTGTTGCTCTGTATCGGTGGACGTAGGTTTGACCGGCTTCTCAGAGGCAGACACAATGAGCCCTCGGATGATGTAAAGCATGCATGTGGGGCTGGAGGCACGGGCACGTTTTGGCAGTATAGTtttttgcttttgttttataTAATTTCGAGCACACATATCGACAAGACTTTGTGACGTATAGGGAGGGATAGCTGGAAAAGTCGGTTCAACGAGTTCGTCTGACATAACGAAGTCGAAATCTCTGGCTAGTCCCCTTCGAAGACGACACcgaaaacaaaacaacattttaCAAAGGACTTGCTAAAGTCAACGACATAAAACAAGAATGTCGATGGTTGCGTATTCAGATTACTTAGCCGCCAAATGTCTGATGTCGATCTCTAGCGGTCCCGTCCTACACCGACCCACCCCGGTTGTCCCCGCCGCCCAGCCCCCTCCCCAGGCCGTTCATCCTGGGGAGCCCGAAGGGTCGAGCGAGGACAGGGAGGTGCGCGAGACGCTGAGACTCGAAGGGGCCAACATGATGACGGTGGCCGGGATCCTCACGGACCTCCACGGCAAGTTCCGGTCCATGTCGGCCTACTCGGAGAGCAGCAACTCCTCATGTGGGGAGAGCGGCTACACCACGTTGTCTGACTCAACTACCCCAACCATGACCCCCTCTGCTACTCCAATTCCTGGACAGTACAATGCTACTCAACAGCAGTGGGGAGGAGGGACGCCTCGGTCCCCAGTAAAGCGACATCAGTGCATTTACGACGGCTGTGACCGAGTTTATGGAAAATCATCTCATCTGAAAGCCCATATCAGAACCCATACAGGTGAACGACCCTTTCCCTGTACCTGGCCCGACTGCCAGAAAAAATTTGCCCGTTCGGACGAGCTGGCTcgccacacgcgcacacacacaggcgagAAGCGCTTCCTGTGCCCGCTGTGCGACAAGCGCTTCATGCGCAGCGACCACTTGATCAAGCACGCCCGCCGCCACCCCGACTTCCAGCCGTCCATGCTGGGCCGCAAGGCCTCGTCCCCTGGGGGACAGGGGGCGTCCAGCCCAGCCATGGGCCAGTAGAGTGCAGGGGTCAGTGGGTTCACTCCCACGTCTAGGGCTGGGGTCAGCAAGGGTAACAGGGAGTGGTCCTAACCAAAGGTCCTAACCAATCAGATCCATTAGCCAGGCCTGTCTGTCACAACTCCCCCCACACAACAGTATCTAGGTGGGGGCACGTTCACCACCCACCCCGACGGATGAAGATGACACCAGTCTCAACGCTCAACTAATACTCAAAACCTTTAACTGAAAAACACTCACACATGCAGGGAATTCTCAATGTCTTCACTCCTCAGTCTCAGCACATGCATCAGCCAAATGTTGTCCTTCCTTTCTCGGCTTATTTTAGAGAAATGGTGCTCCATGCTTTTTTACTGTGGCTGTTTCCTTTCTTGCTAGCGCCATTTTGTGATATTTAACTAGAGGCGTAGAGAGGCTGAGGTCAACTAAAAGTGTAGCAGCTTTGCTGATGACATGTCCTCAGTTTCAAGAGGTTGCACATTCCATGCATTTTTGTCGTTGGAAATTAGTTGGCTtagttataaaaataaaaaaatgtttttgtaataTCGTATTTACTGTATTATAATTTTAAATGCTGGTCAACTTAACTTTCAGTAATGATGATGAATGGTTTAAACCGCTGAAGACTAGCTGGTTACACACCATTCTTATTCATTCTAGATCAACTTTTCAATTTTCTTTTTACTATCCATGAAACCTTGACGAATGATACACGTAATACTAGGTCCGTTACGGATGCAAATGTATATAACCTTTAACCTTCTATTGTAGAGAATATCGTGAACAAATATTAGAGGAAGTAATACTTGTGATGAATTGTAGTCCTTATATTAGGGGTGACAGACTACACACTTGGATAGGATAGCGCTGCCTGTGAGTAAGCGTGTGTCTCTAATTACATTTTGTTAGAGAAAGAGAAGACACTTTCTACAGTTTCCACTTGTCTGTCCATCTTTATGGACATGATTACTTTATCTCAGTGAACAACACTTCAGGAAATTCAGAAAGCCTTAAACTATTTCATACTTATTATTGCACCATGTTTACAGTTTGAATCATTGCTACAGGTTTACGCCGACTCGTCGGCACATTACAAATACACATATGCAATATACCACTTTTAACCAGAGGTTGCTTTTAATGCTAGCTACTTGGCTAATTTGTGTGACAGGTTTTCACTGTGTTAATATGCTTCTACAATTGAACACTGTGGAATTTGATAAAGATACACGTGATCTCATTATACTTATTATAACCAATGGTTAGGTTAGTCAGACACATTTGTCCAAGTGCTTTAGGAAAGTGCGATAAAGGATAGATTGGGGCTAttatgtgttgttttttttaaactgtttcTTTGCTGAGCATAATGACTTGGTTCTATGTATGTGGCTTTTCTCAGACACTATGCTCTCAGAGTCTTGCTATAACTGTAATTTCTTCCACAGAAAGATTGAATTGCGTGACTAAGGCACCTCTCTCGTCATACAGTCCCTCCAATATTTTCCTTCTCTGTCTTTACTAACCAACTGACTTTAATGGATCATTCTTGCTGCATCATTTGGTCACTGTTAGTTCCATTGTAATGGGATGTACCTGTAACTTTTATGTTGAAACGCTTTTGCCGTTTGTACACATTTTCACAAGTTCTTATCTGTTTACAGCTCTCGGTAACTGCTGGCAGTTATCGAACAAAAATGGACTACTTCAAACCAAGCCACAATATGACGTAGTGAAAGTGTTTGCTATGTTTTCAAATGAATTGAAAATGTCTTCATGGATGTCATCATTTtccaaatgtatttgtttaattTTCTGACAGCAAGTCTGCCTCGCGCCAAATTTATGATTATTTCACACAAAGGGTAACAATTTACCTCGCAATGTTTGTGTAATACTTGTCTTCCCTTGGAAAGCAGTTGGACAAAAAGGGACTCCATTAAGAAACTCACCTTTTCTCATGAAACGCTTCTAAACACAATCAAGCCTTAGGTTTGAACTTCCTGTGTTCTTCAAGTGAAAACTACACTCTGCCAGGGAAACAAACATCTCTTTAGTTGTCTTGTCTATATTCTTGATGTATGCTCCGTGTACAGAGTTTTGACTGTGCTTAACACTTTTTCCATAGTATATTACGTACCTGTGGTGTTTCAATAGTGCTGATCATCAATTTTTGCATCTCACAAGTGTTCAGTATGTACCACTACCCTTCATGTGGCACAATGCTACTTAGATCAGTTTAGTCTGGACCTACTGCGGTACATTTTGTAACACTTCATTTCGGTGGTACCTACATAAGGACTTAATAACCCATTCATAAGTAGTACATGAACATTGCATAAATGCTTATGTTAACAagttgatatttcagttttgtcacTATTTGCAGTTAACAAACGTTTATGCAATATTCATTAACTGCTTAAATGTGTACTGTATGGGTTATAAAGTGCTTATGTAGGTTCCCTTCAGATAAAGTCACCAATAACTCAATTTACACTAAATCTGGCTGGGGGGGGAGAGGGCATAACCATATCTCAAACAATGTAATTAATCGGCGCTGAACACCTTATAGGGCATACTATGCTAATTGTTTCCCACTGTACACTAATTAAACAAATCTACACAGCTGCATTGTTTGTATAAGAACCAATATTTTTAGAATTTTGTTAAGCCAAATTTTTACATCAATAACTCTTTTAAGAAACCTCTTATTTGAGCTTTGGTTACGTAGATAAGAGGACCTGTGGAACTAATTGAAAAAATGCTGCAACTTGGTTCTTTGATATTTATACTCTCAGGTGTCTTTTAAACATTTCTTCCATATTTCCTGTGCAACACCCAAGTGTAATCATGTATTGTTGCTATTATTTTAAGGATTAATTTATTAGGATTTATAATTTGCGTGGTTtaattcatttttcccatagctTATTGTTTTGTGATATGGAACATATACTAATAATTCGGTTCCATTGTTTGCTTGACACAGACTGCCAGTACTTTTTCATAATAAATAAAAACCTTAAGTtaaa

Function

NR:

description
Krueppel-like factor 9

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589923.2 True 4237 mRNA 0.42 2 32119973 32129371

Neighbor

gene id symbol gene type direction distance location
tsen15 tsen15 coding downstream 15262 32100303 ~ 32104711 (-)
LOC110508985 LOC106598838 coding downstream 32379 32074971 ~ 32087594 (-)
LOC110508983 LOC106598841 coding downstream 56520 32034823 ~ 32063453 (-)
LOC110508982 NA coding downstream 91538 32023057 ~ 32029225 (-)
LOC110508978 NA coding downstream 113883 32001255 ~ 32014890 (-)
asip2b agrp2 coding upstream 27661 32062049 ~ 32187519 (-)
LOC110508994 LOC106598832 coding upstream 62431 32191802 ~ 32201824 (-)
LOC110508997 NA coding upstream 99054 32228406 ~ 32230258 (-)
LOC110508996 NA coding upstream 112421 32240882 ~ 32243585 (-)
ccdc39 ccdc39 coding upstream 114745 32244116 ~ 32263430 (-)
LOC110508977 NA non-coding downstream 156623 31958284 ~ 31967067 (-)
G2128608 LOC106599183 non-coding downstream 184329 31935028 ~ 31935644 (-)
G2128580 NA non-coding downstream 197281 31922092 ~ 31922692 (-)
G2129021 NA non-coding upstream 138336 32267707 ~ 32268032 (-)
G2129038 NA non-coding upstream 167822 32297193 ~ 32297394 (-)
G2129041 NA non-coding upstream 175928 32305299 ~ 32305562 (-)
G2128568 NA other downstream 236833 31882715 ~ 31883140 (-)
LOC110508968 LOC106598866 other downstream 382481 31708667 ~ 31761665 (-)
G2128242 LOC106584167 other downstream 796609 31319283 ~ 31323364 (-)
G2128216 NA other downstream 875281 31244091 ~ 31244692 (-)
G2130393 NA other upstream 1269176 33398547 ~ 33399084 (-)
G2130771 LOC106598333 other upstream 1910835 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 1912067 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 1912198 34038788 ~ 34058344 (-)

Expression


Co-expression Network