G2113443


Basic Information

Item Value
gene id G2113443
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 18951410 ~ 18956690 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2416819
gtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttgcagtaaaagcaacacagctgaacacaccatccccactgtcaaccatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2416819 True 246 lncRNA 0.46 2 18951410 18956690

Neighbor

gene id symbol gene type direction distance location
LOC110508672 NA coding upstream 85996 18849186 ~ 18865414 (+)
LOC110508669 LOC106599285 coding upstream 134824 18726254 ~ 18816586 (+)
LOC110508668 LOC106599284 coding upstream 227239 18673302 ~ 18724171 (+)
LOC110508667 LOC106599281 coding upstream 292850 18579463 ~ 18658560 (+)
LOC100136150 LOC105009935 coding upstream 531403 18406183 ~ 18420007 (+)
LOC110508675 LOC106599295 coding downstream 30007 18986697 ~ 19011641 (+)
LOC110508679 LOC106599305 coding downstream 248682 19205372 ~ 19209070 (+)
LOC110508681 LOC106599307 coding downstream 260791 19217481 ~ 19322102 (+)
LOC110508686 LOC106599593 coding downstream 415319 19372009 ~ 19374568 (+)
LOC110508689 LOC106599321 coding downstream 482935 19439625 ~ 19458620 (+)
G2113442 NA non-coding upstream 44 18951140 ~ 18951366 (+)
G2113439 NA non-coding upstream 2616 18948482 ~ 18948794 (+)
G2113438 NA non-coding upstream 3661 18947339 ~ 18947749 (+)
G2113433 NA non-coding upstream 7928 18943279 ~ 18943482 (+)
G2113147 NA non-coding upstream 60794 18890380 ~ 18890616 (+)
G2113452 NA non-coding downstream 14117 18970807 ~ 18971098 (+)
G2113455 NA non-coding downstream 20004 18976694 ~ 18976991 (+)
G2113456 NA non-coding downstream 20935 18977625 ~ 18977850 (+)
G2113458 NA non-coding downstream 25313 18982003 ~ 18982484 (+)
G2113486 NA non-coding downstream 26690 18983380 ~ 18983735 (+)
G2113059 NA other upstream 282914 18667115 ~ 18668496 (+)
G2112127 NA other upstream 1047486 17903198 ~ 17903924 (+)
G2111491 NA other upstream 1195829 17754937 ~ 17755581 (+)
G2111457 NA other upstream 1242781 17708256 ~ 17708629 (+)
G2111300 NA other upstream 1535178 17411144 ~ 17416232 (+)
G2113578 NA other downstream 119387 19076077 ~ 19076418 (+)
LOC110508695 LOC106599333 other downstream 666778 19623468 ~ 19636825 (+)
G2115369 NA other downstream 1485043 20441733 ~ 20442169 (+)
LOC110508722 LOC106569260 other downstream 1883880 20840508 ~ 20842019 (+)
G2116347 NA other downstream 2417805 21374495 ~ 21375078 (+)

Expression


Co-expression Network