G2114079


Basic Information

Item Value
gene id G2114079
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 19537886 ~ 19538323 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2417529
gatccttcagatttCGAGGCTgccgctgggcaatacggactttcagctccctccaaagattttctattgggttcaggtctggagactggctaggccactccagaaccttgagatgcttcttatggagccactccttagtttcgctggctgtgtgtttcgagttgttgtcatgctggaagacccagctacgacccatcttcaatgctcttactgagggaaggaggttgttggccaagatctcgcgatacatggccccatccatcctcccctcagtacggtgcagtcgtcctgtcccctttgcagaaaagcatccccaaataatgatgtttccacctccatgcttcacggttgggatggtgttcttggggttgtactcatccttcttcttcctccaaacacggcaagtggagtttagaccaaaaagctctatttttgtct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2417529 True 438 lncRNA 0.50 1 19537886 19538323

Neighbor

gene id symbol gene type direction distance location
LOC110508689 LOC106599321 coding upstream 79266 19439625 ~ 19458620 (+)
LOC118944897 NA coding upstream 86976 19450858 ~ 19450910 (+)
LOC110508686 LOC106599593 coding upstream 163318 19372009 ~ 19374568 (+)
LOC110508681 LOC106599307 coding upstream 215784 19217481 ~ 19322102 (+)
LOC110508679 LOC106599305 coding upstream 328816 19205372 ~ 19209070 (+)
LOC110508279 LOC106599328 coding downstream 47770 19586093 ~ 19589514 (+)
LOC110508695 LOC106599333 coding downstream 85509 19623468 ~ 19636825 (+)
LOC110508697 LOC106599330 coding downstream 118702 19657025 ~ 19667196 (+)
LOC110508700 LOC106599341 coding downstream 386558 19924881 ~ 19933094 (+)
LOC110508704 LOC106599349 coding downstream 799900 20338223 ~ 20364502 (+)
G2114074 NA non-coding upstream 6873 19530793 ~ 19531013 (+)
G2114039 NA non-coding upstream 64533 19472570 ~ 19473353 (+)
G2114016 NA non-coding upstream 69042 19468577 ~ 19468844 (+)
G2113990 NA non-coding upstream 129081 19408527 ~ 19408805 (+)
G2113979 NA non-coding upstream 137644 19400026 ~ 19400242 (+)
G2114076 NA non-coding downstream 5608 19543931 ~ 19546126 (+)
G2114128 NA non-coding downstream 102827 19641150 ~ 19642552 (+)
G2114160 LOC106599334 non-coding downstream 149694 19688017 ~ 19713654 (+)
G2114167 NA non-coding downstream 155316 19693639 ~ 19694314 (+)
G2114205 NA non-coding downstream 219516 19757839 ~ 19758134 (+)
G2113578 NA other upstream 461468 19076077 ~ 19076418 (+)
G2113059 NA other upstream 869390 18667115 ~ 18668496 (+)
G2112127 NA other upstream 1633962 17903198 ~ 17903924 (+)
G2111491 NA other upstream 1782305 17754937 ~ 17755581 (+)
G2111457 NA other upstream 1829257 17708256 ~ 17708629 (+)
G2115369 NA other downstream 903410 20441733 ~ 20442169 (+)
LOC110508722 LOC106569260 other downstream 1302247 20840508 ~ 20842019 (+)
G2116347 NA other downstream 1836172 21374495 ~ 21375078 (+)
smg7 smg7 other downstream 3542093 23056778 ~ 23087821 (+)

Expression


Co-expression Network