G2122290


Basic Information

Item Value
gene id G2122290
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 26557905 ~ 26558422 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2426576
GGGATGATCTCGCTGCAAAGTGCAAAGCGTAAATTACTCTAATGTAAACTGTCACTGCTGACCGCGGGAAATGCACACACTCACCTGTCCCAGGAGTCTCCGGTACCCACTTCAGTGGGCCGATCTGTCGCACCTGGAAAGCGGTCTTCACCTCATGACAGCTGTATGCCCCAACATCCACTACTTTCACCAGAAACAGAACTGAAAACATCCACCAGAAATGTACGCGTGGGCATATTCCTCGGGACATTGCTGCATCTCAATCCAGGTATCCGTGGGTTTAGTGTAAATCGATGATTTCACGGCCTGTTAAAAAATGTATGACACAAATAAAAAGTAGCAGTTGATACTATTAAACGTCCATGATACGACGTCTGCATCGGGTTCTCACATTATTGTTTTTTGTGCATAAAGGCAATCCCACACTGAGTTTATATGAGACGGTATTGTGGACCAAGATTTGTAGATGTACCACTCTCAACACAGGCGCTGTTCGACTGCGTGCacgcttccttctc

Function

NR:

description
glypican-5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2426576 True 518 lncRNA 0.47 1 26557905 26558422

Neighbor

gene id symbol gene type direction distance location
LOC110508792 fam227a coding upstream 440806 26099457 ~ 26117099 (+)
LOC110508192 LOC106599523 coding upstream 1226680 25283026 ~ 25331225 (+)
LOC118944876 NA coding upstream 1291995 25264448 ~ 25265910 (+)
LOC110508787 LOC106599517 coding upstream 1354585 25160851 ~ 25203320 (+)
LOC110508785 LOC106599515 coding upstream 1400164 25118403 ~ 25157741 (+)
trnaw-cca-61 NA coding downstream 66820 26625242 ~ 26625313 (+)
LOC110508795 LOC106599535 coding downstream 69930 26628352 ~ 26656110 (+)
LOC110508796 LOC106599541 coding downstream 98193 26656615 ~ 26675681 (+)
LOC110508797 LOC106599544 coding downstream 121369 26679791 ~ 26688506 (+)
LOC110508800 LOC106599548 coding downstream 148955 26707377 ~ 26709568 (+)
G2122277 NA non-coding upstream 21310 26536207 ~ 26536595 (+)
G2122262 NA non-coding upstream 62893 26494812 ~ 26495012 (+)
G2122259 NA non-coding upstream 66523 26491139 ~ 26491382 (+)
G2122255 LOC106599532 non-coding upstream 74293 26482926 ~ 26483612 (+)
G2122236 NA non-coding upstream 101408 26456226 ~ 26456497 (+)
G2122851 NA non-coding downstream 60165 26618587 ~ 26618957 (+)
G2122853 NA non-coding downstream 61244 26619666 ~ 26619889 (+)
G2122897 NA non-coding downstream 145866 26704288 ~ 26704700 (+)
G2122898 NA non-coding downstream 146348 26704770 ~ 26704988 (+)
G2122902 NA non-coding downstream 154011 26712433 ~ 26712709 (+)
G2122177 NA other upstream 183345 26357538 ~ 26374560 (+)
G2121837 NA other upstream 836231 25720440 ~ 25721674 (+)
LOC110508774 LOC106599485 other upstream 2447195 24101070 ~ 24137027 (+)
G2118574 NA other upstream 3393582 23163866 ~ 23164323 (+)
LOC110508761 LOC106599440 other upstream 3454572 23102409 ~ 23103987 (+)
G2123101 NA other downstream 383778 26942200 ~ 26945187 (+)
G2123174 NA other downstream 542890 27101312 ~ 27104270 (+)
G2123170 NA other downstream 547612 27106034 ~ 27109282 (+)
LOC110508827 LOC106599210 other downstream 1162178 27720549 ~ 27725061 (+)

Expression


Co-expression Network