G2125253


Basic Information

Item Value
gene id G2125253
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 28627055 ~ 28685735 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2429906
GTCTCATGTTGCAGACTGTTTATGTGACAACACTACGTAGACAGACACACTTATCAATCACACTATAAACTGGGAGCATGCTGACCAATAAAAAGTGGCACCAGATTCACAAGGAGCGATGCATCACATTTAGGGTGGGTTATGGATAGATCAGCTACTCTACAAGTTCTTCTGTCACAGTGATGATTTGAGGTTTATTTTTAGGGATCTAAACTCTAATAAAAAGGCATGGAAGCACACAGCAATGGGTTGTCACTTGACTAATTTCATAGTACAGTACATTTTGATACCATCTTTAAAAGGATCTCCATGGACCGGGTAGCAGTGCAGGCGACACACGGTTAAAGTTCAACTGCCTATGAGGTTAGCTGGTTTAAAACAGTCGGTCTTCCAAACCCTTCCAATACTTTATCTTTAATACTTTATCATTAAGTGCTTTAACATTAGCTCATGTATCTACTGTAACATAGGGATCATACCTTGACAACACTAAGTCAGCCGTCAAATGAGGCCGTGAGCTAAAATTTCCCAATGCTGTCCACAACCACTAGAATTGCTGGTGTTCACAAGGCATTAGTGTATACTTGCGAGCCCAGTAGGTTTAATGCATAGGGTGTACACGTGGTCCAAAACAAGACAACAAACACCACACTATGAAGGTGAATTAAAACAGTGCCGGACTACAGGAGGACATTAGATCATGGGGCGAGTCTCCGCCCACAGGAAGTGAGGTGCTATATGTCGTGGAGGACTTCCAGCACCGTGGAGATGGACCAGGCCTGTGATTCGCAGCTGAAGGGACAGTACTGGCCATTCTCATTGcactgccagagccctgcaaaatgacctccagcaggccacaaatgtgcatgtgtctgctcaaacggtcagaaacagactccatgagggtggtatgagggcccgacgtccacaggtgggggttgtgcttacagcccaacaccgtgcaaggacgtttttcatttgccagagaacaccaagattggcaaattcgccactggcgccctgtgctcttcacagatgaaagcaggttcacactgagcacatgtgacagacgtgacagtctgaagACGCCGTGgaaaacgttctgctgcctgcaacatcctccagcatgaccggtttggcggcgggtcagtcatggtgtggtgtggcatctctttggggggccgcacagccctccatgtgctcgccagaggtagcctgactgccattaggtaccgagatgagattctcagaccccttgtgagaccatatgctggtgcggttggccctgggttcctcctaatgcaagacaatgctagacctcatgtggctggagtgtgtcagcagttcctgcaagaggaaggcattgatgctatggactggcccgcccgttccccagacctgaatccaattgagcacatctgggacatcatgtctctctccatccaccaacgccacgttgcaccacagactgtccaggagttggcggatgctttag

Function

NR:

description
transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2429906 True 1498 TUCP 0.49 2 28627055 28685735

Neighbor

gene id symbol gene type direction distance location
plppr5a LOC106599133 coding downstream 120116 28463481 ~ 28506939 (-)
LOC110508849 NA coding downstream 223162 28398505 ~ 28403893 (-)
LOC110508200 NA coding downstream 259846 28193876 ~ 28367209 (-)
LOC118944862 LOC106599141 coding downstream 558597 28044850 ~ 28068458 (-)
LOC110508843 LOC106599203 coding downstream 624857 27999061 ~ 28002198 (-)
LOC110508857 LOC106599111 coding upstream 20353 28706088 ~ 28753683 (-)
dusp12 dusp12 coding upstream 71843 28757578 ~ 28760180 (-)
LOC110508860 LOC106599100 coding upstream 131869 28817604 ~ 28840725 (-)
LOC110508863 LOC106599199 coding upstream 174990 28860725 ~ 28862370 (-)
LOC110508862 LOC106599098 coding upstream 208080 28893815 ~ 28901239 (-)
G2125197 NA non-coding downstream 86681 28538254 ~ 28540374 (-)
G2125143 NA non-coding downstream 169432 28457381 ~ 28457623 (-)
G2125130 NA non-coding downstream 186983 28439793 ~ 28440072 (-)
G2124908 NA non-coding downstream 205843 28421007 ~ 28421212 (-)
G2124904 NA non-coding downstream 207794 28418918 ~ 28419261 (-)
G2125314 NA non-coding upstream 54469 28740204 ~ 28740958 (-)
G2125328 NA non-coding upstream 80261 28765996 ~ 28766210 (-)
G2125336 NA non-coding upstream 82844 28768579 ~ 28768817 (-)
G2125659 NA non-coding upstream 87682 28773417 ~ 28773659 (-)
G2125660 NA non-coding upstream 88155 28773890 ~ 28775656 (-)
G2125203 LOC106599130 other downstream 75541 28544941 ~ 28551514 (-)
LOC110508791 LOC106568850 other downstream 2557846 25677135 ~ 26069268 (-)
G2122515 NA other downstream 2676602 25946733 ~ 25950453 (-)
G2121457 NA other downstream 3352429 25198248 ~ 25274626 (-)
G2121444 LOC106599515 other downstream 3478535 25144062 ~ 25148520 (-)
G2125290 NA other upstream 6404 28692139 ~ 28692470 (-)
G2125723 NA other upstream 199733 28885468 ~ 28885854 (-)
G2125813 NA other upstream 392304 29078039 ~ 29078744 (-)
LOC118944842 NA other upstream 432949 29118684 ~ 29123806 (-)
LOC110508917 LOC106598978 other upstream 1715478 30399711 ~ 30401807 (-)

Expression


Co-expression Network