G2125270 (agla)


Basic Information

Item Value
gene id G2125270
gene name agla
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 28662708 ~ 28663426 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2429926
AACACCAGATACgtcaaataaagtgtgacctgGGATTTAACCCCCACCACTCCAGTGCTGTATCTACTACATGTCAACGTCCAGTACCTCTGACAAGACTGGTTATCCCCAGGCGGTTAACAAACACATTGTCAATCAGCTCGCTGCCCGTAAAGAGCTCAGCGATTACATACAGGTTGGGCCTGATCGCCCTGGCTGCAGACAGCATGTGCTAGCGACATGCAGAGGGGTGGAGTGACAGTTGTCCAGGCGGACCCCAGCGAAGTGCTTGGCCGTGATCTCGGTGTACTTCTGCATGTGGGCCCACAGGTAGGGACAGTCCTCGGGCTTGTTGCCGTAGCGAAGTTTGACACTGTCGCCCCAGCAGATCAACTCTCTCCTGATGTACACGTTGGAGCCTGGAAAGATGGAGAggcatttgttttctttcaattCTCAGACTTGGCCTTTAGTAACACTGGGAATTATATTTACATCACACTGGCTCCCCCTTGTGG

Function

symbol description
agla Predicted to enable 4-alpha-glucanotransferase activity and amylo-alpha-1,6-glucosidase activity. Predicted to be involved in glycogen catabolic process. Predicted to act upstream of or within glycogen biosynthetic process. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in glycogen storage disease III. Orthologous to human AGL (amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2429926 True 497 TUCP 0.52 2 28662708 28663426

Neighbor

gene id symbol gene type direction distance location
LOC110508854 LOC106599121 coding downstream 22784 28632715 ~ 28639924 (-)
plppr5a LOC106599133 coding downstream 155769 28463481 ~ 28506939 (-)
LOC110508849 NA coding downstream 258815 28398505 ~ 28403893 (-)
LOC110508200 NA coding downstream 295499 28193876 ~ 28367209 (-)
LOC118944862 LOC106599141 coding downstream 594250 28044850 ~ 28068458 (-)
LOC110508857 LOC106599111 coding upstream 42662 28706088 ~ 28753683 (-)
dusp12 dusp12 coding upstream 94152 28757578 ~ 28760180 (-)
LOC110508860 LOC106599100 coding upstream 154178 28817604 ~ 28840725 (-)
LOC110508863 LOC106599199 coding upstream 197299 28860725 ~ 28862370 (-)
LOC110508862 LOC106599098 coding upstream 230389 28893815 ~ 28901239 (-)
G2125259 LOC106599119 non-coding downstream 21544 28640204 ~ 28641164 (-)
G2125197 NA non-coding downstream 122334 28538254 ~ 28540374 (-)
G2125143 NA non-coding downstream 205085 28457381 ~ 28457623 (-)
G2125130 NA non-coding downstream 222636 28439793 ~ 28440072 (-)
G2124908 NA non-coding downstream 241496 28421007 ~ 28421212 (-)
G2125272 LOC106599117 non-coding upstream 3115 28666541 ~ 28667665 (-)
G2125314 NA non-coding upstream 76778 28740204 ~ 28740958 (-)
G2125328 NA non-coding upstream 102570 28765996 ~ 28766210 (-)
G2125336 NA non-coding upstream 105153 28768579 ~ 28768817 (-)
G2125659 NA non-coding upstream 109991 28773417 ~ 28773659 (-)
G2125203 LOC106599130 other downstream 111194 28544941 ~ 28551514 (-)
LOC110508791 LOC106568850 other downstream 2593499 25677135 ~ 26069268 (-)
G2122515 NA other downstream 2712255 25946733 ~ 25950453 (-)
G2121457 NA other downstream 3388082 25198248 ~ 25274626 (-)
G2121444 LOC106599515 other downstream 3514188 25144062 ~ 25148520 (-)
G2125290 NA other upstream 28713 28692139 ~ 28692470 (-)
G2125723 NA other upstream 222042 28885468 ~ 28885854 (-)
G2125813 NA other upstream 414613 29078039 ~ 29078744 (-)
LOC118944842 NA other upstream 455258 29118684 ~ 29123806 (-)
LOC110508917 LOC106598978 other upstream 1737787 30399711 ~ 30401807 (-)

Expression


Co-expression Network