G2128353 (bok)


Basic Information

Item Value
gene id G2128353
gene name bok
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 31570477 ~ 31572013 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2433435
GAGACTTCATGTACCAGTGACGGAATAGGACAGTTGTTCCAGACACCTGATGTTCTTGTGTGTTGCCAAAAATCAGCCCTGACTGGTCAGCTTGTGCAACATCAACCCCCAACCCTTTGAAGTTGTTCACCTGCTGCGAATATCTCTGTTGCCACGGCAACGAAGGCATCAGAAACCATGGTCTCCATGGCTACTGAGATGTTGAGCTGTCTCGCCACGTTCCGGTAGACACTGGGCCGCATGCACTCCAGCTCATCACCTAGGAAAACCAGGGGCGACCACAAGGCTGAACATTTAGGAACAGGATAGCACTGAGAAAGCATGACTGGTCTATCAACCCAATTAATGACAAAGTGGCAATCCGTAATTGAAACAATAAAGTGCCTAGCCGCCTGTTTCgttaaaaagctgagggatagggctggagaaatgtaatcgCTCAAATTcttagacagagctatggatgcaaggactgaccagccATGATTTCAAACCTATAGTTTCAATcatgttgaggctatatagcaatggatacatATTCATTTATACATCCAAAATGGATGCAGAAACTGCAGATTGTTTCACTGTCTAATAAGGGGCAGTCATTGAACCACTGGGGCATTAGTTTCTATGACCAGTCTGGTTATCCTAAATCAGTTTTTCCCCAAACCTTTGGGCTCTGTGACCAAGCTTTTAGAGATGTATTGTGATCAACAAAGTAAACAAATCTATTGTCTTGGCCACAAACCAACCCAAGCTGAACAAATCAGCCATAGCCCACCAGTGTGTCCAGACAGGTCCTGCGCAACCCATTTAGTAAATATAGATGATGAACAAGAGGGGCCTGTGGGGTATGTAAGTGTCATCTCACCTGTCTCAATTAGCATACCACACTGAACCATTCAGTAGCTTGATTGCTCTCACCTCGGACTGCCAGACGGTTTTAATAGCATTCTGGGTCATGCATGTCAGTCCTTAATCTCAAGGCAAGCCACTGATACACACGTGGTGGACAAATCCAGTACAGTGTGTACCATATCTATTCAGTGGAACATAGGGATTCTCAAGAGAAATTAGGCTATTTTTTATGTGAAGTTTCACATGTAACGGTTTGCAGCAGGTTCTTACCGAGACAGAGAAGCACAGCAGCCACATCACAAAGCGTTGAGTCCACCTGAGTTTTGGACGAGCCTAGCCCATAGAGGTTGAGCCTAGAGTGTATGTAGTCCCTACACAGTGCCTTGGACTTGGACACCAGTTCTTTGTCTGACGGGGAATGATCAAAGGCCTCCATCACCCCGGCTGCAAACACAGAAGAGCGACGAATCACCTCCATCTCCCAAACAGGATTCTGATTAGGAAAAACCTGACCACTTCAGTGTATCAGTGCCTGAATGGTTCTGCTCAGCGGCAGCTCCCAAAATGAAGATAATCTTTAAATc

Function

symbol description
bok Predicted to enable protein heterodimerization activity and protein homodimerization activity. Involved in several processes, including activation of cysteine-type endopeptidase activity involved in apoptotic process; apoptotic signaling pathway; and regulation of apoptotic process. Located in several cellular components, including Golgi apparatus; endoplasmic reticulum membrane; and mitochondrial inner membrane.

NR:

description
PREDICTED: bcl-2-related ovarian killer protein isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2433435 True 1442 lncRNA 0.46 2 31570477 31572013

Neighbor

gene id symbol gene type direction distance location
trnav-aac-156 NA coding downstream 9679 31560726 ~ 31560798 (-)
stk25b stk25 coding downstream 10098 31542758 ~ 31560379 (-)
trnap-ugg-71 NA coding downstream 48905 31521501 ~ 31521572 (-)
LOC110508960 LOC106598900 coding downstream 59254 31508406 ~ 31511223 (-)
cldn18 LOC106598896 coding downstream 62190 31505514 ~ 31508287 (-)
thap4 thap4 coding upstream 4865 31576878 ~ 31584196 (-)
nilt2 nilt2 coding upstream 107410 31679423 ~ 31694153 (-)
LOC110508968 LOC106598866 coding upstream 136654 31708667 ~ 31761665 (-)
nilt3 nilt3 coding upstream 146676 31718689 ~ 31763088 (-)
LOC110508970 LOC106598862 coding upstream 250129 31822142 ~ 31859100 (-)
G2128345 NA non-coding downstream 15748 31551762 ~ 31554729 (-)
G2128341 NA non-coding downstream 28970 31541291 ~ 31541507 (-)
G2128336 NA non-coding downstream 46606 31523536 ~ 31523871 (-)
G2128330 NA non-coding downstream 58471 31511784 ~ 31512006 (-)
G2128316 bok non-coding upstream 1471 31573484 ~ 31593171 (-)
G2128385 LOC106568769 non-coding upstream 44355 31616368 ~ 31619525 (-)
G2128386 NA non-coding upstream 47727 31619740 ~ 31620149 (-)
G2128399 NA non-coding upstream 66697 31638710 ~ 31643463 (-)
G2128418 LOC106598876 non-coding upstream 96702 31668715 ~ 31669787 (-)
G2128242 LOC106584167 other downstream 247113 31319283 ~ 31323364 (-)
G2128216 NA other downstream 325785 31244091 ~ 31244692 (-)
LOC110508928 mrpl34 other downstream 863932 30705085 ~ 30706591 (-)
G2127455 NA other downstream 1015290 30553589 ~ 30555187 (-)
G2127177 NA other downstream 1135623 30434435 ~ 30434854 (-)
G2128568 NA other upstream 310702 31882715 ~ 31883140 (-)
LOC110508982 NA other upstream 451045 32023057 ~ 32029225 (-)
asip2b agrp2 other upstream 490036 32062049 ~ 32187519 (-)
LOC110508997 NA other upstream 656393 32228406 ~ 32230258 (-)

Expression


Co-expression Network