G2130462


Basic Information

Item Value
gene id G2130462
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 33552883 ~ 33554094 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2435965
cactgtaaagtctacactgttggttaagggcttgtaagaaagcatttcactgtaaagtctacactgttggttaagggcttgtaagaaagcatttcactgtaaagtctacactgttggttaagggcttgtaagaaagcatttcactgtaaagtctacacttgttgtattcggtgcatgtggcaAATTAagtgtgatttgatttgagagtgtAGGCTGTAGAAGGACTGGGAGAAGGACAGGAGTGGGGCTTAGCCAGTAAGGGTTAGTAAGTAAGGGTGAACCAGTTCATTTGTAATCTGCTTGTGAGGGATGGTAGGCCAAACTGGTCATAGAGAGAACAGTGTTGGGTGTGGTAGGGGGATCCAGTGGGAGAGAACAGGGTTGGGTGTGGTAGGGGGCTCTAGTGTGAGAGAACAGGGTTGGGTGTGGTAAGGGGCTCCAGTGGGAGAGAACAGGGTTGGGTGTGGTAAGGGGAGAGAACAGGGTTGGGTGTGGTAGGGGGCTCCAGTGTGAGAGAACAGGGTTGGGTGTGGTAGGGGGCTCCAGTGTGAGAGAACAGGGTTGGGTGTGGTAAGGGGCTCCAGTGTGAGACAACAGGGTTGGGTGTGGTAGGGGGCTCCAGTGTGAGAGAACAGGGTTGGGTGTGGTAAGGGGCTCCAGTGGGAGAGAACAGGGTTGGGTGTGGTAGGGGGCTCCAGTGTGAGAGAACAGGGTTGGGTGTGGTAGGGGGCTCCAGTGTGAGAGAACAGGGTTGGGTGTGGTAAGGGGCTACAGTGGCTAACCTAATGGCTGAGTGGTACAATGTCCAGTTTTCAATCTAGCCTATATTTGTTTTCctattgtaaaaaatatattgctTGTTATCGTTTGACAAGTGAGCTTTTGTCTGTGCTTTCTGTCTGCCTTTGTCGACTGTGTtttcatccatccacccatctatctatttggataaaagtgtctgctaaatggcataaaTATTATGATATGAATTCTAATATTTAGGGTTGCACGATATATCAGTGAACATATCGAaatcggccgatattagctaaaaatgccaacatcatgtctagtttaacgccgatgtcaaagctgacgtgcagaCCTATATAACAcaggtacatgacgtaatgacaTCACGTAACATTTTacactacacgtgcaacacagcattcctaacctggCCCACAATGTCTTCTGTGTGGATCGAGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2435965 True 1212 lncRNA 0.47 1 33552883 33554094

Neighbor

gene id symbol gene type direction distance location
LOC110509036 LOC106598444 coding downstream 26186 33518704 ~ 33526697 (-)
LOC110509034 LOC106598452 coding downstream 38422 33406673 ~ 33514461 (-)
LOC110509030 LOC106598456 coding downstream 171683 33313433 ~ 33381200 (-)
dynlt5 tctex1d1 coding downstream 239592 33310003 ~ 33313291 (-)
LOC110508227 LOC106598474 coding downstream 245590 33278554 ~ 33307293 (-)
LOC110509037 LOC106598611 coding upstream 923 33555017 ~ 33562140 (-)
LOC110508228 NA coding upstream 9841 33563935 ~ 33568603 (-)
LOC110509038 LOC106598425 coding upstream 18016 33572110 ~ 33575991 (-)
trnav-cac-89 NA coding upstream 28466 33582560 ~ 33582632 (-)
LOC110508229 LOC106598404 coding upstream 72357 33626451 ~ 33797286 (-)
G2130409 NA non-coding downstream 119830 33432755 ~ 33433053 (-)
G2130404 NA non-coding downstream 126028 33426418 ~ 33426855 (-)
G2130398 NA non-coding downstream 139520 33412968 ~ 33413363 (-)
G2130394 NA non-coding downstream 152873 33399735 ~ 33400010 (-)
G2130476 NA non-coding upstream 23698 33577792 ~ 33578201 (-)
G2130484 NA non-coding upstream 39620 33593714 ~ 33594568 (-)
G2130506 NA non-coding upstream 77739 33631833 ~ 33632058 (-)
G2130508 NA non-coding upstream 81469 33635563 ~ 33635926 (-)
G2130514 NA non-coding upstream 95382 33649476 ~ 33649702 (-)
G2130393 NA other downstream 153799 33398547 ~ 33399084 (-)
LOC110508997 NA other downstream 1322669 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 1387861 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 1524325 32023057 ~ 32029225 (-)
G2128568 NA other downstream 1669743 31882715 ~ 31883140 (-)
G2130771 LOC106598333 other upstream 486112 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 487344 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 487475 34038788 ~ 34058344 (-)
G2131621 NA other upstream 931775 34485869 ~ 34486176 (-)
G2131641 NA other upstream 962428 34516522 ~ 34518129 (-)

Expression


Co-expression Network