Gene
RNA
| Item | Value |
|---|---|
| gene id | G2131318 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 34483109 ~ 34483386 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2436949 | True | 278 | lncRNA | 0.44 | 1 | 34483109 | 34483386 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509050 | LOC106598248 | coding | downstream | 1250 | 34422172 ~ 34481859 (-) |
| LOC110509056 | LOC106598260 | coding | downstream | 161519 | 34304706 ~ 34321590 (-) |
| vcam1a | LOC106598299 | coding | downstream | 182481 | 34284268 ~ 34300628 (-) |
| zgc:110366 | LOC105007548 | coding | downstream | 214092 | 34258195 ~ 34269017 (-) |
| LOC118944872 | NA | coding | downstream | 232671 | 34247945 ~ 34250438 (-) |
| LOC110508232 | NA | coding | upstream | 88647 | 34572033 ~ 34604132 (-) |
| LOC110509072 | atp1b3 | coding | upstream | 229881 | 34713267 ~ 34728197 (-) |
| gk5 | gk5 | coding | upstream | 254076 | 34737462 ~ 34761423 (-) |
| LOC110509071 | LOC106598156 | coding | upstream | 290369 | 34773755 ~ 34806814 (-) |
| LOC110509075 | LOC106598143 | coding | upstream | 329331 | 34812717 ~ 34824535 (-) |
| G2131281 | NA | non-coding | downstream | 73657 | 34405857 ~ 34409452 (-) |
| G2131285 | NA | non-coding | downstream | 77771 | 34405003 ~ 34405338 (-) |
| G2131283 | NA | non-coding | downstream | 79061 | 34403636 ~ 34404048 (-) |
| G2131282 | NA | non-coding | downstream | 81607 | 34400956 ~ 34401502 (-) |
| G2131279 | NA | non-coding | downstream | 85122 | 34397717 ~ 34397987 (-) |
| G2131619 | NA | non-coding | upstream | 312 | 34483698 ~ 34483954 (-) |
| G2131623 | NA | non-coding | upstream | 10733 | 34494119 ~ 34494644 (-) |
| G2131643 | NA | non-coding | upstream | 85116 | 34568502 ~ 34570391 (-) |
| G2131691 | NA | non-coding | upstream | 103332 | 34586718 ~ 34587111 (-) |
| G2131696 | NA | non-coding | upstream | 113869 | 34597255 ~ 34597523 (-) |
| G2130780 | LOC106598333 | other | downstream | 415036 | 34041438 ~ 34068073 (-) |
| G2130771 | LOC106598333 | other | downstream | 416444 | 34040206 ~ 34066665 (-) |
| LOC110509052 | LOC106598333 | other | downstream | 424839 | 34038788 ~ 34058344 (-) |
| G2130393 | NA | other | downstream | 1084025 | 33398547 ~ 33399084 (-) |
| LOC110508997 | NA | other | downstream | 2252895 | 32228406 ~ 32230258 (-) |
| G2131621 | NA | other | upstream | 2483 | 34485869 ~ 34486176 (-) |
| G2131641 | NA | other | upstream | 33136 | 34516522 ~ 34518129 (-) |
| lyrm4 | lyrm4 | other | upstream | 1522103 | 36005489 ~ 36017873 (-) |
| LOC118944844 | riok1 | other | upstream | 1540394 | 36023714 ~ 36025735 (-) |
| G2132971 | NA | other | upstream | 1740827 | 36224213 ~ 36225379 (-) |
