G2135995


Basic Information

Item Value
gene id G2135995
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 39332995 ~ 39346646 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2442593
gagagagagagagagagagagagagagagagagagagagagcggcaccCTGTCCCCAAaagtgacccctgacccctagacaCTTCTCTACTAACCCCTAGTCACGGTGTTGATCTGAGAGTACTGAGAAGGTTTGAGCTGCATGGCAAAAAAAAGTGGGGGAAACGTTTACCATGTTACCTCCTCTCAAATCTACACGTGTCTAGAGATAGAATCACTATCTCCTTTATTACATAGGTATCTTTAGAGTAGAaatggtctagggtgtcaggggtcagaggttgGTTTGGAACAGGCCAAGGGTTCCAGATTAGAGGTGATGGCAGTCCTGATGGCAGAAAGCAGAAAGACTAGAGACCGATATTTTTGGGGGAATATTTATAAACTGTATCCTTCCTGATAGCAGATAGACAGATACTGATGGAAATATAGAGAGACTGTACACCTAATTTCTGTTACTTCCTCAATCGGCTGATCAAACtaacggagagagagagagagagctagagagagagagagagagcgagagagagagagagagagctctgcgtgtctgtgtgcttgCTGTGTTGCCTCGCTCCAGGTGTTTGACCGTGATAACACGGGTCGGTCTGTGCTGCAGTCTTTTGTAAAGTCCCAAACCCCTTCAGTCTAGATCTGCATCCAGGCCCAGTCTGCTGTTTATCCATAGTTCTGCATCCAGGCCCAGTCTGCTGTTCAGAGTTCTAGTACTCCAGAGCCACTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2442593 True 745 lncRNA 0.48 4 39332995 39346646

Neighbor

gene id symbol gene type direction distance location
LOC118944870 LOC106596806 coding downstream 630387 38685275 ~ 38702608 (-)
LOC110509133 LOC106592421 coding downstream 659774 38657804 ~ 38673221 (-)
LOC110509132 LOC106596853 coding downstream 688245 38574717 ~ 38644750 (-)
LOC110509127 LOC106596915 coding downstream 1336773 37766370 ~ 37996222 (-)
LOC110509123 LOC106596905 coding downstream 1728115 37578708 ~ 37645494 (-)
LOC110509137 LOC105025287 coding upstream 231571 39577116 ~ 39621092 (-)
LOC118944811 NA coding upstream 233048 39579694 ~ 39582551 (-)
rab31 rab31 coding upstream 289817 39633741 ~ 39650366 (-)
LOC118944836 ralbp1 coding upstream 367982 39714554 ~ 39717684 (-)
LOC110509148 LOC106596679 coding upstream 373051 39719697 ~ 39763225 (-)
G2135992 NA non-coding downstream 524 39331031 ~ 39332471 (-)
G2135991 NA non-coding downstream 5015 39327149 ~ 39327980 (-)
G2135954 NA non-coding downstream 79813 39252578 ~ 39253182 (-)
G2135878 NA non-coding downstream 231693 39100809 ~ 39101302 (-)
G2135834 NA non-coding downstream 337682 38995080 ~ 38995313 (-)
G2136008 LOC106596709 non-coding upstream 31565 39378211 ~ 39378968 (-)
G2136009 NA non-coding upstream 32544 39379190 ~ 39379395 (-)
G2136010 NA non-coding upstream 33217 39379863 ~ 39380100 (-)
G2136011 LOC106596709 non-coding upstream 33738 39380384 ~ 39382268 (-)
G2136040 NA non-coding upstream 77560 39424206 ~ 39426743 (-)
G2135837 NA other downstream 326945 39005461 ~ 39006050 (-)
G2135034 LOC106596897 other downstream 806075 38519571 ~ 38526920 (-)
G2134625 NA other downstream 1202588 38128129 ~ 38130407 (-)
LOC110509111 LOC106597319 other downstream 2775542 36526794 ~ 36557532 (-)
LOC110509145 ankrd12 other upstream 457149 39778552 ~ 39829207 (-)
G2136189 NA other upstream 596507 39943153 ~ 39945834 (-)
LOC110508256 LOC106596607 other upstream 643917 39973367 ~ 40103148 (-)
G2136243 NA other upstream 704993 40051639 ~ 40121899 (-)
G2137086 NA other upstream 1068657 40415303 ~ 40415540 (-)

Expression


Co-expression Network