trnaa-ugc-225


Basic Information

Item Value
gene id trnaa-ugc-225
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 37378219 ~ 37378294 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-ugc-225
ggtcccgtgtggctcagttggtagagcatggcacttgcaatgccagggttgtgggtttgaatcTCATGGGGGACCA

Function

NR:

description
Deoxyribonuclease gamma precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-ugc-225 True 76 mRNA 0.57 1 37378219 37378294

Neighbor

gene id symbol gene type direction distance location
cdx1b LOC106563735 coding upstream 19615 37351989 ~ 37358604 (+)
LOC110510189 LOC106563733 coding upstream 101847 37270550 ~ 37276372 (+)
LOC118945320 NA coding upstream 111198 37264759 ~ 37267070 (+)
LOC110510192 LOC106563729 coding upstream 113745 37243074 ~ 37264474 (+)
cd74b LOC100136155 coding upstream 142921 37232336 ~ 37235298 (+)
LOC110509455 LOC106563789 coding downstream 94508 37472802 ~ 37479922 (+)
LOC118945295 LOC106563789 coding downstream 106797 37485091 ~ 37488837 (+)
ssh2b LOC106563791 coding downstream 126219 37504513 ~ 37548113 (+)
LOC118945269 LOC106563791 coding downstream 168239 37546533 ~ 37548119 (+)
LOC110510232 coro6 coding downstream 195511 37573805 ~ 37614717 (+)
G2180771 NA non-coding upstream 32184 37345821 ~ 37346035 (+)
G2180769 NA non-coding upstream 34703 37343291 ~ 37343516 (+)
G2180750 NA non-coding upstream 62658 37315200 ~ 37315561 (+)
G2180749 NA non-coding upstream 64018 37312138 ~ 37314201 (+)
G2180747 m-csfr non-coding upstream 68150 37308931 ~ 37310069 (+)
G2180798 NA non-coding downstream 14111 37392405 ~ 37396882 (+)
G2180811 NA non-coding downstream 39123 37417417 ~ 37468092 (+)
G2180819 NA non-coding downstream 101323 37479617 ~ 37488986 (+)
G2180824 NA non-coding downstream 121018 37499312 ~ 37499577 (+)
G2180382 NA other upstream 336034 37041723 ~ 37042185 (+)
G2180378 NA other upstream 395605 36982346 ~ 36982614 (+)
G2180218 LOC106563757 other upstream 697922 36678571 ~ 36680297 (+)
G2179454 LOC106602907 other upstream 1453188 35912490 ~ 35925031 (+)
G2179418 NA other upstream 1521757 35851654 ~ 35856462 (+)
G2180897 NA other downstream 282293 37660587 ~ 37662215 (+)
G2180928 NA other downstream 326854 37705148 ~ 37705729 (+)
G2181669 NA other downstream 795762 38174056 ~ 38184872 (+)
LOC110509461 uspl1 other downstream 1419263 38760853 ~ 38819031 (+)

Expression


Co-expression Network