LOC110521532 (LOC106584351)


Basic Information

Item Value
gene id LOC110521532
gene name LOC106584351
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 20717114 ~ 20719732 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021599135.2
CAACAAGGAGACTGGTCGCTCCACCCCCGCAGATGGTGGAGTGAGAGCCCACAGAGTGGAGTTAGCTTCTGGGTTAAATACTATCTCAGGATAGGTGCAACTTCAGATATGACATACAATGGTTCCAAACACTAACCCCACACATCCCATGCCAGACCTTGGGCCCCAAATACAAATAACTTGTTTTGTTCAGTACTAAGAACTTGGGACATTTGTTGttactttgttctctctcttagtTCAAGTTGGAAACTATCTCCCCCTTGGAGGTGACTGACACAGACACTGTGGAGACAAGTGATTGGTTCCCCATTACtcacgccatcccttcacatggtatgcaataaagacacacacacagttcacatATGGAAACAATGTTTCCTTCTGACCTCCTTTGCCATACTCCTTGCTGATATTCTGTATAGCAACAGGGACGTGATAGATAAGGCtgacttctcccctctctggACCCAAGGTGACTGAGGCCCATGAGGGAGGAAGTGCAGCTGCCAACACCAGAGCCCGAAAGGAGATATTCTAATAACAGTTTCAACAGTTCAATCATGTAAGCATATTCTGCAGATAAGACATCTTAAATATCTGTGTTACTTAGCTAATTCTGATTTCTCCACCACAATCTTTCCCCAGAAACAGGTTCCAAAACAGAACAATAGCTCTGTTACTGGTGTGCAGGATATAACCTTTAGTCTGTCCAGGATCAAGAGGAACCAGTCAGTTTCTGTCACATTCTCGGTTGAGTGCCCGGACATCATGGGTTCAttctacacacacagaacagttaGAACAGGCCTATATCAATGTGCGCACACACCTTTCTATGTTATAGGAGTTACTTTTTAACAATCTCAAGCCCAATGTCTAGGCTTGAAGGATATCTTAGTACACAAGCATTATTAAGGTTTAACAGACATTTCCCTCAGGGTCAATAAACTATATCTTTGATGTAAGTCACAGAAGTAATTTGCCCTTATCCCTGGGGCAAAGTAACTTTCCTGAATTGACCTCGAAAAGGGCAGTGTGTATTTTGGCAGGTGGTGTGGGATGAAAAGTCAGTGTTTCTGTGTTGAGAAAAACACTTCTCCACGTTGTCACAATCACACAGACAACAAACTGCCCAACAAGTCATACACTGTGTGAGAAGAACCAGCGAGGTGTAGTAGCTAGCATCTGTGAACCTAACTATGTCTGAACTTGATGTCTCCCTTGTTTACTTTCTTGCTGTTGTGGCATTTGGTGCAGTCTTTAGAGTCCTTTTCAGAAAATGGCCTTGTTTGAGCTTTGCATCAGAGTTCACAACCTCATTTGTGCTGGTGGCATGCTGGCTGGAGGTGCAGACCATTATAGAGATTGGTGAGTGGGCAGAGGGACTGGGATCAGACGTTACTCTGACAATACGGTTTGTGGTGCTGCTGACCCATGGTGTGATCTGTGCTGGAGCCACTGGAAACCCCTCCCTGACTCTGATGAATTTCCTGCTGCTGGAGACCCCTACTCTACACACTCTGCTAGCTTTGGCTGCTCAGTTCCTGGGGGCACACCTGGCCCTGATTGTAGCTGGCTACTACTGGGCAATGGAGCTCAATGACATGCACATAATTAAGAACCTGATATTCAGGGAGTGCAGTACAGCCCTGCGTGTCTCCCTGGTGCAGGGGGTctattctgagtgtgtgtgtgcattcatctTTTATCTGATATACCTCAGCCTGAGATGTCGCGCTGTGTTGATTCGGGTGCCTTTCTTTGCAGCTGTGCTCACCCTTCTCTCTCATGCAGCCAGTGGTTATACCTCAGCTTTCCTGAACCCCTCCCTTGCCTATGGCCTTACCTTCTACTGTCCTGGGTTTACCTTTACGGAGTACTCAGTGGTCTACTGCCTTGGGCCCATTATTGGAATGACCCTGGCCCTTCTCCTGTACATGGGTCACATCCCCAGGATTTTTGCAAAGAATCTGCTGTATTCCCAGAAGACCCACGTACAGGTGCCAAAGGGGGACGGAGATGAAAAGAAAAAGTGAAAGAAAGACATCATCCACCTCAGCTGAGGCAATATAGGACATATGTGTGCATTAGGAACACACTACTCAATTTTGTTCCTATTGGGAGAAGATATTTCATTATGCACTGAGCATTATATTCAACAGCCTATTCTCTCCTTAAGTTACTGACAAAAAAGGTGTGGGCTGTAGAACATCTGTACATTAAGTTACAACTCATATCGCCTGTGTTCTTACAGAAGTAATAAATcaattaaaaatac

Function

NR:

description
aquaporin-12-like

GO: NA

KEGG:

id description
K09871 AQP12; aquaporin-12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021599135.2 True 2284 mRNA 0.45 3 20717114 20719732

Neighbor

gene id symbol gene type direction distance location
LOC110521534 NA coding downstream 2503 20705949 ~ 20714611 (-)
plekhb2 pkhb2 coding downstream 61782 20648384 ~ 20655332 (-)
cts12 LOC106584253 coding downstream 86345 20628580 ~ 20630769 (-)
lama3 LOC106584357 coding downstream 89125 20611261 ~ 20627989 (-)
LOC110521523 LOC106584358 coding downstream 106666 20596104 ~ 20610448 (-)
LOC110521545 NA coding upstream 632983 21352715 ~ 21360879 (-)
LOC110521548 LOC106584340 coding upstream 947467 21666793 ~ 21800817 (-)
LOC110521551 LOC106584337 coding upstream 1290611 22010343 ~ 22107387 (-)
LOC110522763 LOC100286605 coding upstream 1460365 22180097 ~ 22654975 (-)
LOC110521557 LOC106584333 coding upstream 1575882 22295614 ~ 22321717 (-)
G2210830 NA non-coding downstream 4454 20643335 ~ 20712660 (-)
G2210822 NA non-coding downstream 74736 20642033 ~ 20642378 (-)
LOC110521519 NA non-coding downstream 177326 20533878 ~ 20539788 (-)
G2210771 NA non-coding downstream 192755 20523695 ~ 20524359 (-)
G2210769 NA non-coding downstream 194003 20518340 ~ 20523111 (-)
G2210919 NA non-coding upstream 88311 20808043 ~ 20808280 (-)
G2210926 NA non-coding upstream 98628 20818360 ~ 20818560 (-)
G2210929 NA non-coding upstream 99837 20819569 ~ 20819843 (-)
G2210934 NA non-coding upstream 107342 20827074 ~ 20827313 (-)
G2210935 NA non-coding upstream 108743 20828475 ~ 20828828 (-)
LOC110521508 LOC106584371 other downstream 581899 20129636 ~ 20197258 (-)
LOC110521505 LOC106584372 other downstream 633530 20067742 ~ 20083690 (-)
LOC110521464 LOC106584409 other downstream 2393709 18306119 ~ 18392555 (-)
G2208093 NA other downstream 2529589 18187125 ~ 18187525 (-)
G2211274 ttc14 other upstream 585109 21304841 ~ 21306542 (-)
G2212755 NA other upstream 946232 21665964 ~ 21666615 (-)
G2212908 LOC106613883 other upstream 1188231 21907963 ~ 21910736 (-)
LOC110521564 LOC106584326 other upstream 2266627 22982517 ~ 23008109 (-)
G2213654 NA other upstream 2458774 23178506 ~ 23179611 (-)

Expression


Co-expression Network