G2328215


Basic Information

Item Value
gene id G2328215
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 40040012 ~ 40041968 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2662576
AACCCTAGCAACACAATTTGTTTATTGTCATGTCATGCCATGTCAGAGCTTAATATCAATGACAGAGTTGcaagggaagaaaagagagagagagcacttagACAATCTTGCAAAGCAAATTGGTCAATGTAACATCTCTAATGTTAAGTTGTGTTAAATTCTCTCTGTAATTGTTAAATTAACACTCATTGGTGTAAAAGAatcccagtgttggtgttaataaccagtgttAAACCAAAACcacgcccatcattatcatatttcccagcatgctctactgcaggcatattttttagaattgtttcaatatctatgtaTTTGCATGTACATTCATTAATCTTATTCTTCTCAAATATAactaacatacatttttctaaactaatccaatctggtACTTGGACTTCCACaccattactgaaatggttgttccagttaaGATGCTTAAGGTGGCCTTATATGTTAATGTAGTTGTTCTGAATGCAGGATGAGTGTCATTAAAAATTCTAAATGTTTTATATCcacactctggctggattccaatagaaaTTACACATCGCTTTGCAAGCCAGcctaatgtgacttgcaggcctgatgtggcctgtaaacaaTGAGTTTCCCGTCACTGTTTAATGGTAAAAGGCCTTAAAAAATACATGATATATTGTGTTACATAAGAAAAACTGTATGATAATGTATTCACTTATGTATTCACTTGATGGAGGCCACAGGGCTGAAAAtggatgaatgcaacaaccatgtctctgtcactaacaaatacagtcatgggtggtaactctaaaCTTCACTCGAAAGGCAAGGCcttctgggaaatatgcaaataaggctttacactgagcagtgtgttaatttaacactgaaaaATGTGGATCTGTATAGACACTGGACCTGTGTTAAATTTAACGCTATctgtgttgatttaacactgtcAGTGTTAATCTAACACTGGAGAATTTGATGTGTAGCAAATGTCAAGCAACAGCTCAAGAACAACTTGAGATGGCCTGACTTGACTGTACATTGTGGAATgtactgtagtatagtgttgCATTGCGTGATTGTAGATGGGcaaagggagaaagaaggaatGCAAATATAAAAACATTTAGTATTGCATGTGTGTCAGTGTATTTCAAGATTAATCAGCTCTACAGGTGTGTAAATGTGTCAAAATTTCAGAGGGTGTCAAAATTTCACATCAATGAATGGCAAAAtgaattatatatacatataataaaGTATAGTGTGCTATATAGAGGGAAGTATATCAATGCAAGTAATTGTAGTGTAGTTTATTTTAGTACCAAATACTGggtttatgtatgtgtgtatgaacATGTATGTGCTATTGTGGTGTTACAACATATACTGTACTGcatggtattattattattatggtatTAGCACTCCTGTTTGAAGGGGGGGGTTGTATAGTGTACTGTAGTTTGTATTAGGGTAGTGAGGTGTCTATCAGTttggtgttggtgtgtattgtaaTGTCCGGACTGGACCGGTGGTAAACTCCTATGAGGCCTCCTTTGTCTTCTCCTCCTCGGTTGCTGCTGGTGCTGGCTCCTCCACCTTTTTCGCCTCTTCCACCTTTTCTTCCTCTACGGCTGCCTCTGCTGGTGCCTCTACAGTTGTGGCTGTCTCTGGCTCAGCCTGTGCCTCCTCTGGCTGTGCCTCGGcttctgccttctcttcctttaCCTCTGTTGCTGCTGGTGCTGGTGCATTCTTGGTCTCTGTTGTGGCGGCCGCACTCTCAGCTGGCGTGTCCACGGCAGCGGTGCATTGCACGCTCAGGGAGGTTGCTAGGTAGCCCACCAGCTTCATGTACTCCTCGAAGTTGACTTTACCGTCCTGGTTAGCGTCCAGGCCCTGTTGCATTTTCTTCACCGCCTCGGAGCTGTCAG

Function

NR:

description
protein S100-A13-like, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2662576 True 1934 TUCP 0.40 2 40040012 40041968

Neighbor

gene id symbol gene type direction distance location
cks1b LOC106570108 coding downstream 59433 39963657 ~ 39980579 (-)
LOC110488485 NA coding downstream 86565 39951194 ~ 39953447 (-)
LOC118946504 NA coding downstream 91061 39945963 ~ 39948951 (-)
LOC110488484 LOC106588171 coding downstream 195247 39752140 ~ 39844765 (-)
LOC110488480 LOC106570105 coding downstream 343290 39670725 ~ 39735519 (-)
LOC110516488 LOC106570115 coding upstream 217436 40259404 ~ 40268880 (-)
LOC110488394 LOC106570116 coding upstream 227051 40269019 ~ 40283507 (-)
LOC118946520 LOC106570180 coding upstream 266234 40308202 ~ 40309497 (-)
LOC110511528 LOC106570118 coding upstream 301972 40343940 ~ 40363925 (-)
LOC110518971 LOC106570128 coding upstream 610589 40652557 ~ 40659632 (-)
G2328214 NA non-coding downstream 9251 40029512 ~ 40030761 (-)
G2328186 NA non-coding downstream 55202 39984278 ~ 39984810 (-)
G2328219 NA non-coding upstream 2437 40044405 ~ 40044690 (-)
G2328220 NA non-coding upstream 3869 40045837 ~ 40046096 (-)
G2328229 NA non-coding upstream 17020 40058988 ~ 40059193 (-)
G2328236 NA non-coding upstream 26240 40068208 ~ 40068604 (-)
G2328237 NA non-coding upstream 26686 40068654 ~ 40068932 (-)
G2327652 NA other downstream 485081 39547083 ~ 39554931 (-)
LOC110517409 LOC106570099 other downstream 529207 39508407 ~ 39510810 (-)
G2327348 LOC106588182 other downstream 723060 39310442 ~ 39316952 (-)
G2327347 LOC106570093 other downstream 730021 39308560 ~ 39309991 (-)
mrps21 mrps21 other downstream 805144 39149872 ~ 39234977 (-)
G2328245 NA other upstream 40395 40082363 ~ 40082846 (-)
G2328279 LOC106570112 other upstream 94624 40136592 ~ 40139184 (-)
G2328315 LOC106570114 other upstream 166085 40208053 ~ 40208731 (-)
G2328836 NA other upstream 606836 40648804 ~ 40649422 (-)
usf2 LOC106569770 other upstream 977308 41019276 ~ 41048657 (-)

Expression


Co-expression Network