G2329997


Basic Information

Item Value
gene id G2329997
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 41758587 ~ 41764759 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2664507
GGTCGGCGTCgggcggtagggccggacctaccgggaagtcatcgaattAACTTTGTCGGACAGTCGGTTTCcgtttaataaaataaacaagttttggaccgtttttccgctatcccggaaattcccacaagagggcatacggaatcatatggcaatttggcaaaacatcacgaatcacgacggggccttatcttgaaaacggaaaatattttgaagccgaaacttggtgagcgtaggtttggcataatgggcagttggccccgaacaagatggcgtctaggcctcaacggtttttgagttatggccatttttctgggattaaaggtcctaaatggaaatagagaaattatttttccacttcaggtcaaagtcaaggagcctccggtgtcaataaaagaagaaccagccatttatctattgtcatttaagagaaacggaacaatgacaaattggagatgttcacaaataggcgtttttttttttcaacggttacagatccagttgcggggtgttcatacgaatctttttaaagtgtgaggcggagctctgcgagatttctgtgattttctgaaataacacacacactaaaccctccgtaaataactcaATTCTTAACGttaagacttaaaactcaggattatgtaaaggcataccccaatcaggatatgagtttatttatagcttcctgtgccaaccagaagtgccttaaatggtgtcatagtggctgtttccaagggttaaaaaggtcagatcttttcaaaacttcatgtgtgattaggcaacccccataaactgtaagtcagtaatttctcccaacagatgtcaaagaaaagctctcacacacacacacacaccgcaaggatggagtgacaaagtgcagtgcttaaagacacagagagcaggcaatgcatgcattaccataatccctaggccgtgccgagttcaacgagctatcccgcttgaccgtagctcgctcggtctaagcgcaacgaccattagaaaagtaggcccaaaatgaagcctgccccacaatgtcatttgcttttgagtgacagtgagagaaccgttagggtgagaagaaaaattccaccacatgaatgttcctaaggtcctcccgatccgtgcaagcctaaccttgaccgtgtggcattaacccttaacagtaaaacagtgttttttgggTGTTTTTTgagttatgaatgccgtatgaacctgtcttcggtaccagtccatcaggccactatgaggtctacctgtgttgattctaagcttcctggaccaaccggaagtggttaaaatgcccctaaaagtgtatatccataccctgcctgcagtttgacagaCATCGTGCATTCaagcctgtgtaaatcagtcaattcttaacgaaAAGACTTAAAAcacaggattctgtaaaagcataccccaatgaggatatgtgttgatttatagcttcctgtgccaaccggaagtgccataattggtgtctcaggggctgtttcgaggggttaagaaagtctgatctttccaaaacttcatatgtgtgattaggcaacccccatgaactgtaaatcagtcatttttcccc
>TU2664508
GGTCGGCGTCgggcggtagggccggacctaccgggaagtcatcgaattAACTTTGTCGGACAGTCGGTTTCcgtttaataaaataaacaagttttggaccgtttttccgctatcccggaaattcccacaagagggcatacggaatcatatggcaatttggcaaaacatcacgaatcacgacggggccttatcttgaaaacggaaaatattttgaagccgaaacttggtgagcgtaggtttggcataatgggcagttggccccgaacaagatggcgtctaggcctcaacggtttttgagttatggccatttttctgggattaaaggtcctaaatggaaatagagaaattatttttccacttcaggtcaaagtcaaggagcctccggtgtcaataaaagaagaaccagccatttatctattgtcatttaagagaaacggaacaatgacaaattggagatgttcacaaataggcgtttttttttttcaacggttacagatccagttgcggggtgttcatacgaatctttttaaagtgtgaggcggagctctgcgagatttctgtgattttctgaaataacacacacactaaaccctccgtaaataactcaATTCTTAACGttaagacttaaaactcaggattatgtaaaggcataccccaatcaggatatgagtttatttatagcttcctgtgccaaccagaagtgccttaaatggtgtcatagtggctgtttccaagggttaaaaaggtcagatcttttcaaaacttcatgtgtgattaggcaacccccataaactgtaagtcagtaatttctcccaacagatgtcaaagaaaagctctcacacacacacacacaccgcaaggatggagtgacaaagtgcagtgcttaaagacacagagagcaggcaatgcatgcattaccataatccctaggccgtgccgagttcaacgagctatcccgcttgaccgtagctcgctcggtctaagcgcaacgaccattagaaaagtaggcccaaaatgaagcctgccccacaatgtcatttgcttttgagtgacagtgagagaaccgttagggtgagaagaaaaattccaccacatgaatgttcctaaggtcctcccgatccgtgcaagcctaaccttgaccgtgtggcattaacccttaacagtaaaacagtgttttttgggTGTTTTTTgagttatgaatgccgtatgaacctgtcttcggtaccagtccatcaggccactatgaggtctacctgtgttgattctaagcttcctggaccaaccggaagtggttaaaatgcccctaaaagtgtatatccataccctgcctgcagtttgacagaCATCGTGCATTCaagcctgtgtaaatcagtcaattcttaacgaaAAGACTTAAAAcacaggattctgtaaaagcataccccaatgaggatatgtgttgatttatagcttcctgtgccaaccggaagtgccataattggtgtctcaggggctgtttcgaggggttaagaaagtctgatctttccaaaacttcatatgtgtgattaggcaacccccatgaactgtaaatcagtcatttttcccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2664507 False 1585 lncRNA 0.44 2 41758587 41764759
TU2664508 True 1585 lncRNA 0.44 2 41758587 41764759

Neighbor

gene id symbol gene type direction distance location
LOC110529149 LOC103393926 coding downstream 11197 41746288 ~ 41747390 (-)
nudcd1 nudc1 coding downstream 82899 41644320 ~ 41675688 (-)
LOC110487689 plec coding downstream 149207 41469563 ~ 41609380 (-)
eppk1 LOC106598963 coding downstream 313454 41418547 ~ 41445133 (-)
LOC110488433 LOC106569773 coding downstream 621031 41126017 ~ 41137556 (-)
G2329984 NA non-coding downstream 10156 41748168 ~ 41748431 (-)
G2329969 NA non-coding downstream 14282 41743882 ~ 41744305 (-)
G2329876 NA non-coding downstream 179775 41578378 ~ 41578812 (-)
G2329742 NA non-coding downstream 273516 41484866 ~ 41485071 (-)
G2329608 NA non-coding downstream 427050 41331122 ~ 41331537 (-)
G2329998 NA non-coding upstream 243 41765002 ~ 41765349 (-)
G2330000 NA non-coding upstream 5129 41769888 ~ 41770104 (-)
G2330006 NA non-coding upstream 19927 41784686 ~ 41785165 (-)
G2330010 NA non-coding upstream 28700 41793459 ~ 41816996 (-)
G2329495 NA other downstream 501247 41253995 ~ 41257340 (-)
usf2 LOC106569770 other downstream 730636 41019276 ~ 41048657 (-)
G2328836 NA other downstream 1109165 40648804 ~ 40649422 (-)
G2328315 LOC106570114 other downstream 1549856 40208053 ~ 40208731 (-)
G2329999 NA other upstream 4009 41768768 ~ 41769560 (-)

Expression


Co-expression Network