LOC118947143 (LOC106595224)


Basic Information

Item Value
gene id LOC118947143
gene name LOC106595224
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493666.1
NCBI id JAAXML020000359.1
chromosome length 1258143
location 1041289 ~ 1043295 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118947143
ATGAAGACGGTGAGGAATACAACCCCGAGCGTGATGCGGACGACTACGACGACGACTCGGCCTCACGGTCGTGCTCCTCTTcggaggaagagcgagagggagagcgagagggagacacgGCCGCTGCccgagagcgagacacagccagagagccagagcgagacagagaggacgTTGCTGTCAAAGAACGGCAAAATCAAATGGTCCTCCGTGGCCTATCGCGGCCCGGACCGGCCCCGCGCCATCCGCCGCCACGGCTCCGTCGTGACGCCGGGCCCCAAGGCCTACGCCGCGTCGCGAGCGCTCGACATCGAGTCCACCTTCCGGCTGTTTGTCACACCGGCGATAGAAAGGATCATTGTGGACATGACAAATCTGCAGGGGGTGAGAAAATACGGCGACGGCTGGCGACCCATGGACTCCACCGACCTGCGCGCCTACGTAGGGCTGCTGATCCTAGCCAGCGTCTACAGGTCCCGAGGCGAGGCCGCGGCCATCCTGTGGGACGCCGAGAGCAGAGCGGCAGGACCGTGTTCCGCGCCACCATGCCGCTCAAGGTGTTTCACAAGTACTCGAGGCTGCTGCGATTCGACGACCGCCAGTCGAGACCCGCCAGACTCGCCACCGACAGACTGGCGGCCATAAGAGAGGTATGGGACCTGTGGGAGGAGCGGCTGCCGGCCCTCTACAACCCGGGGCCCGACCTGACGGTGGACGAACAACTGGTCCCGTTCAGAGGACGCTGTCCTTTCCGACAGTACATTCCCAGCAAGCCGGCCAAATACGGCATCAAGTCGTGGGTGGCCTGCGACGCCAAGTCCAGCtacgcttggaagatgcaagtctacacCGGCAAGGCGGCCGGCGGAGGCCCCGAGAAGAACCAGGGCGCCCGCGTTGTCCTCGATCTGACCGAGGGACTGCCGGGCGGTCACAACGTCAcgtgtgacaatttcttcacctccTACGAACTGGGCCAGCGGCTCCTCGAGAGGAACCTCACCATGGTGGGCACGGTGAGAAAGAACAAGGCCGAGCTCCCGCCCGCACTGCTCGAGTCAAAGGGCAGACAGGTCCTGTCCTCCAGGTTCGCCTTCACGCCCACCGCCACTCTAGTGTCCTACCTGGCAAAGAGAAATAAGAACGTGCTACTTCTGAGCACGCTGCACGCGGAGCCCGACGTTAGTGTTCGCCGCGACCGGAAGCCGGCCCTCATCCTAGACTACAACTGCAACAAGGGCGGCGTGGACAACCTAGACAAGGTGGTCGGGACCTACAGCTGCAGACGGATGAccgcccgctggcccctggtcatcttccacaaCATCCTCGACGTGTCCTCCTACAACGCCTTTGTCATATGGCGAGAGATCAAGCCCGACTGGATGCCTGGGaagcggaacaagaggagggtgttcccgGAGCAGCTCGGAAAGGCACTCGTGAAGCCCTTGATACAAAGAAGGCAGCGTCTCCCCCGCACCCAAGCCGCGTCCGCACTTGTCAAAGTCCTACAGAGTGCCACCGCCGAGGCTCGTCCGCCAGCCCGGGAGCAAGCCGCTGGCCCGGCCGCCGCCGCCCCAGCCGCCCCGCCGGTGGCGAGTAAGAGGAAGAGGTGTCAGCTCTGCCCACCCAAGAAGGACGCCAAGACCTACACCGCGTGCTGCAGGTgtaagaaatacatctgcaaaggctGTTCACACGCATACTGTCAAACTTGTGCCCACTGGGCCTTTAGCCAAGACGGGACAGGGTGA

Function

NR:

description
piggyBac transposable element-derived protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118947143 True 1757 mRNA 0.63 2 1041289 1043295

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-275 NA coding downstream 1548 1039670 ~ 1039741 (-)
trnat-ugu-133 NA coding downstream 2288 1038930 ~ 1039001 (-)
trnaa-cgc-68 NA coding downstream 3116 1038102 ~ 1038173 (-)
trnat-ugu-132 NA coding downstream 10756 1030462 ~ 1030533 (-)
trnaa-ugc-274 NA coding downstream 12222 1028996 ~ 1029067 (-)
LOC118947154 NA coding upstream 9930 1053225 ~ 1053343 (-)
trnaf-gaa-186 NA coding upstream 16778 1060073 ~ 1060145 (-)
trnai-aau-177 NA coding upstream 16933 1060228 ~ 1060301 (-)
trnai-aau-178 NA coding upstream 18481 1061776 ~ 1061849 (-)
trnaf-gaa-187 NA coding upstream 19001 1062296 ~ 1062368 (-)
G2341006 NA non-coding downstream 893 1005923 ~ 1040396 (-)
G2340949 NA non-coding downstream 49286 876032 ~ 992003 (-)
G2340974 NA non-coding downstream 106025 933491 ~ 935264 (-)
G2340968 NA non-coding downstream 120191 917005 ~ 921098 (-)
G2340897 NA non-coding downstream 221663 811254 ~ 819626 (-)
G2341021 NA non-coding upstream 15510 1058805 ~ 1115633 (-)
G2341025 NA non-coding upstream 16562 1059857 ~ 1064279 (-)
G2341020 NA non-coding upstream 25286 1068581 ~ 1074200 (-)
G2341032 NA non-coding upstream 74466 1117761 ~ 1120758 (-)
G2341059 NA non-coding upstream 140972 1184267 ~ 1184799 (-)
G2340951 NA other downstream 112157 878809 ~ 929132 (-)
G2340905 NA other downstream 226634 806890 ~ 814655 (-)
LOC110514508 LOC106595224 other downstream 924573 114200 ~ 116716 (-)
G2340407 NA other downstream 978151 62414 ~ 63138 (-)
G2341053 NA other upstream 115303 1158598 ~ 1164054 (-)

Expression


Co-expression Network