LOC120557716 (LOC104930044,LOC103368287,LOC102204811,LOC102301891)


Basic Information

Item Value
gene id LOC120557716
gene name LOC104930044,LOC103368287,LOC102204811,LOC102301891
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 46318376 ~ 46337333 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798275.1
agcagaagaagaagaagaagaagaagacagcgACAACGACAACAAGCGTCAACTCGGACCATCTCTGGACCATGATAGACAACAGTCTAGCTATGTGCTAGAAGGGTTAGCTAGAAGAATGAAGGGAACCTAAATAGTTTCGTGCGTTGTTGCTGGCTAGTTGACAAAAGTGTAACAAAAGAAATGGCGGTCGCAGCTGTTTGTGTATAGAAAGTGCTTTggttttttaaactatttttacTGCGTGCCGAGATAGCTAAAGAACCCCCGGATGAAGGAGCGTTCACAGGATGGCAGGAGTGTTCGACATAGACTTGGAGACTGAGGACATCAGTGATACAGAGGATGATGTCTGTGACTTCACTGTGACAGAACCAGAGATTGTGCAAaaagaggaggtggagttgACCAGTGAAAGTGTCaacagagacagtgagagagttGGACCTGACTGTTTTGAGCTTCTTACTGTGCTGGGAAAAGGAGCCTATGGGAAGGTTTTCCAGGTGAGGAAGGTTCAAGGTGCTCAGATGGGGAGCATATTTGCCATGAAGGTCCTGAAAAAGGCGAAGATAGTGTGTAATGCTAAAGACACGGCCCATACACGAGCAGAGCGGGAGATCCTAGAGACGGTGAGACACCCATTCATCGTCGATCTGCTCTACGCCTTCCAGACTGGGGGGAAACTCTACCTCATACTGGAGTGTCTGAGTGGAGGGGAGCTGTTCATGCAGCTGGAGAAGGAAGGCATCTTCATGGAGGACACTGCTTGTTTCTATCTAGGAGAAATCACTTTGGCTCTAGGTCACCTCCACTCCAACGGGATTATTTACCGGGACCTCAAACCTGAAAACATCATGCTTAATCACCAAGGACACATCAAGCTAACTGACTTTGGCCTCTGTAAGGAATCGATTCATGATGGATCTGTTACACACACCTTCTGTGGCACCATAGAGTACATGGCTCCAGAGATCCTGACCAGGTCGGGTCACAACAGAGCAGTAGACTGGTGGAGCCTCGGGGCCCTGATGTACGATATGATGACCGGATCACCTCCATTCACAGCTGGAAACAGGAAGAAGACCATCGATAAGATCTTGAAGTGTAAACTCAATCTGCCCCCATACCTGACCATCGATGCCAGGGACCTTATCAAGAAGctgCTGAAGAAGAATCCAGCCCAAAGACTTGGCTCCAGTACGACGGATTGTGCTGAAATCCAGAAACATCCGTTCTTCAAGCATATCAACTGGACTGACCTGCTCAACAAGGCAGTGGAGCCGCCATACAAGCCACGACTGCAGTCGGACGAGGATGTAAGCCAGTTTGACACCAGATTTACCAGACAGACACCAGTGGACAGTCCAGACGATACCACACTCAGCCACAGTGCAGAGCTTGCCTTTGCTGGTTTCACCTACGTGGCTCCGTCGGTCCTTGAGAGTCTAAAAGAAGGTTTCTCATTTGAACCCAGAACACGAGCTGTACGCCGACACAACAGCAGCCCACGCACACCcatcagTCCTATGAAATTCTCCCAAGCCggaccattcaagtccagcatTGAGGGAGAACCAGACCTTTTCTCTCCCATCTCTCCACCGGCAGCTACAGTTCCTGTGACGCTGGAAAACGGTGGTACCAGTCAGCCGATAAAGACGCCTGCAAGGAACAAGAAGCAGAAGGGACATCAGAGATGAGAAGGAAATCTTAAAAGAGACGGCCTACGCTACAAGACCTTGGTCAGAACATTTTTCATAGTTTATAGTAAGTGTGAGGCACAGAGCTGAAGTGTTTTTGCTggttttaatgctttttttgaAGTGGTTTAAACTAATGAGGTCCTTGAAAAGCCATAAATCAAAAGTGGAAAGCTCTC

Function

NR:

description
PREDICTED: ribosomal protein S6 kinase beta-2-like isoform X2

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K04688 RPS6KB; ribosomal protein S6 kinase beta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798275.1 True 1882 mRNA 0.48 16 46318376 46337333

Neighbor

gene id symbol gene type direction distance location
gstt1b NA coding upstream 217049 46080099 ~ 46101327 (+)
ddt ddt,LOC103368817,LOC104931754,LOC108247357 coding upstream 239357 46068792 ~ 46079019 (+)
chchd10 chchd10,LOC100703844,LOC102306302,LOC102209825,LOC101482224 coding upstream 252807 46057091 ~ 46065569 (+)
p2rx3b p2rx3,LOC103356184,LOC101065458 coding upstream 408586 45869403 ~ 45909790 (+)
tmx2b LOC100701608,LOC103356189,LOC102313962,LOC102233014 coding upstream 627025 45681248 ~ 45691351 (+)
LOC120562127 NA coding downstream 9637 46346970 ~ 46373840 (+)
si:ch73-6k14.2 NA coding downstream 55513 46392846 ~ 46401365 (+)
LOC120543662 NA coding downstream 1863537 48200870 ~ 48202754 (+)
neurl1aa LOC108246381,LOC103355274,LOC104926624,LOC102796982,LOC101477033,LOC102303708,LOC100693641 coding downstream 1876971 48214304 ~ 48320857 (+)
LOC120564817 slc24a3,LOC100695245 coding downstream 2160132 48497465 ~ 48609279 (+)
G12537 NA non-coding upstream 27308 46290741 ~ 46291068 (+)
LOC120557712 NA non-coding upstream 32897 46283048 ~ 46285479 (+)
G12522 NA non-coding upstream 49350 46268812 ~ 46269026 (+)
G12485 NA non-coding upstream 152628 46165530 ~ 46165748 (+)
G12484 NA non-coding upstream 153981 46164192 ~ 46164395 (+)
G12559 NA non-coding downstream 135345 46472678 ~ 46472913 (+)
G12566 NA non-coding downstream 143848 46481181 ~ 46481459 (+)
G12568 NA non-coding downstream 169731 46507064 ~ 46507393 (+)
LOC120567408 osbpl5 non-coding downstream 180882 46518215 ~ 46522032 (+)
G12575 NA non-coding downstream 206871 46544204 ~ 46544441 (+)
trnak-uuu_1 NA other upstream 110651 46207653 ~ 46207725 (+)
trnat-ugu NA other upstream 111372 46206932 ~ 46207004 (+)
G12491 NA other upstream 148687 46166405 ~ 46169689 (+)
trnae-cuc NA other upstream 153823 46164482 ~ 46164553 (+)
G12311 LOC102783284,LOC102207724,LOC106675709,LOC102300942,LOC102207434,LOC108250287 other upstream 672403 45638080 ~ 45645973 (+)
G12553 NA other downstream 79095 46416428 ~ 46417773 (+)
LOC120564084 LOC100694180 other downstream 508684 46846017 ~ 47125487 (+)
G12872 NA other downstream 2091467 48428800 ~ 48488219 (+)
G12873 NA other downstream 2147915 48485248 ~ 48486493 (+)

Expression


Co-expression Network