Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120564233 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053119.1 |
| NCBI id | CM020916.1 |
| chromosome length | 42187026 |
| location | 36185963 ~ 36188270 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU121421 | True | 602 | lncRNA | 0.50 | 3 | 36185963 | 36188270 |
| XR_005640081.1 | False | 341 | lncRNA | 0.52 | 3 | 36185963 | 36187960 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| siah1 | siah1,LOC102794717 | coding | upstream | 79513 | 36065628 ~ 36106450 (+) |
| n4bp1 | n4bp1,LOC101465464 | coding | upstream | 137552 | 36018268 ~ 36048411 (+) |
| cbln1 | cbln1,LOC104949597 | coding | upstream | 492258 | 35659713 ~ 35693705 (+) |
| si:ch211-212o1.2 | LOC103358434,LOC100695703,LOC102310624 | coding | upstream | 599422 | 35512384 ~ 35586541 (+) |
| znf423 | znf423 | coding | upstream | 678679 | 35338892 ~ 35507284 (+) |
| st3gal2 | st3gal2,LOC102780992 | coding | downstream | 180491 | 36368761 ~ 36390263 (+) |
| exosc6 | exosc6 | coding | downstream | 241232 | 36429502 ~ 36431389 (+) |
| tgm2l | LOC103363999,LOC104953692,LOC102308322 | coding | downstream | 256823 | 36445093 ~ 36458111 (+) |
| trnal-cag_1 | NA | coding | downstream | 275216 | 36463486 ~ 36463568 (+) |
| LOC120564167 | NA | coding | downstream | 277425 | 36465695 ~ 36489643 (+) |
| G90162 | NA | non-coding | upstream | 77701 | 36107745 ~ 36108262 (+) |
| G90161 | NA | non-coding | upstream | 78472 | 36107043 ~ 36107491 (+) |
| G90151 | NA | non-coding | upstream | 272683 | 35913071 ~ 35913280 (+) |
| G90138 | NA | non-coding | upstream | 414562 | 35770996 ~ 35771401 (+) |
| G90131 | NA | non-coding | upstream | 488262 | 35697497 ~ 35697701 (+) |
| LOC120563515 | NA | non-coding | downstream | 51878 | 36240148 ~ 36240998 (+) |
| G90217 | NA | non-coding | downstream | 66131 | 36254401 ~ 36254823 (+) |
| G90218 | NA | non-coding | downstream | 66905 | 36255175 ~ 36255566 (+) |
| G90236 | NA | non-coding | downstream | 124444 | 36312714 ~ 36368430 (+) |
| G90238 | NA | non-coding | downstream | 164040 | 36352310 ~ 36358218 (+) |
| G90142 | NA | other | upstream | 400547 | 35784694 ~ 35785416 (+) |
| LOC120563677 | gnao1,LOC103367675,LOC108249535,LOC107660763,LOC100693875 | other | upstream | 1195551 | 34847563 ~ 34990412 (+) |
| G89836 | NA | other | upstream | 1750646 | 34434089 ~ 34435317 (+) |
| G89813 | NA | other | upstream | 1764782 | 34381836 ~ 34421181 (+) |
| G89811 | LOC100698998 | other | upstream | 1823586 | 34360484 ~ 34362377 (+) |
| anapc13 | anapc13 | other | downstream | 327741 | 36516011 ~ 36517921 (+) |
| mt2 | NA | other | downstream | 342703 | 36530973 ~ 36531996 (+) |
| wfdc1 | wfdc1,LOC102778323 | other | downstream | 1834107 | 38022377 ~ 38034694 (+) |
| G90583 | NA | other | downstream | 1866239 | 38054509 ~ 38055564 (+) |
| G90686 | NA | other | downstream | 2470096 | 38658366 ~ 38680087 (+) |
