mt2


Basic Information

Item Value
gene id mt2
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 36530973 ~ 36531996 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU121506
GCAATAAAAGCGCCGCCCATTCTGTGGCAGCCACAACACTGACTCGACCGAGAGCCGATACACAGCACCTTCACACGAAGACGAGCGAAATCAACTGAAAAAAATGGATCCCTGCCCGTGCTCCAAGGGTGGAACCTGCAACTGCGGAGGATCCTGCACTTGCACGAACTGCTCCTGCACCACCTGCAAGAAGAGCTGCTGCCCATGCTGCCCATCCGGCTGCCCCAAGTGCGCCTCTGGATGTGTCTGCAAAGGGAAAACTTGTGACACCGCCTGCTGCCAGTGAGGATCCTCCTGGATCAGCCCCGTTCTACCCTCATGATTGAGCCGGTGTGCACCACCTTGAATTATTAATTGCAGCTGCAAACGTCTACAGAGAATAATTCATTTTTGTACGGTCTTCAGTGTTGAAATAAATGTGATTCCTAATGTGA
>XM_039809863.1
GGAGTTTGCACGCGGTCCTGTTGTCCCCAGGACGCAATAAAAGCGCCGCCCATTCTGTGGCAGCCACAACACTGACTCGACCGAGAGCCGATACACAGCACCTTCACACGAAGACGAGCGAAATCAACTGAAAAAAATGGATCCCTGCCCGTGCTCCAAGGGTGGAACCTGCAACTGCGGAGGATCCTGCACTTGCACGAACTGCTCCTGCACCACCTGCAAGAAGAGCTGCTGCCCATGCTGCCCATCCGGCTGCCCCAAGTGCGCCTCTGGATGTGTCTGCAAAGGGAAAACTTGTGACACCGCCTGCTGCCAGTGAGGATCCTCCTGGATCAGCCCCGTTCTACCCTCATGATTGAGCCGGTGTGCACCACCTTGAATTATTAATTGCAGCTGCAAACGTCTACAGAGAATAATTCATTTTTGTACGGTCTTCAGTGTTGAAATAAATGTGATTCCTAATGTGA

Function

GO:

id name namespace
GO:0009070 serine family amino acid biosynthetic process biological_process
GO:1901605 alpha-amino acid metabolic process biological_process
GO:1901607 alpha-amino acid biosynthetic process biological_process
GO:0008652 cellular amino acid biosynthetic process biological_process
GO:0006563 L-serine metabolic process biological_process
GO:0006564 L-serine biosynthetic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121506 False 434 lncRNA 0.52 3 36531006 36531996
XM_039809863.1 True 467 mRNA 0.53 3 36530973 36531996

Neighbor

gene id symbol gene type direction distance location
LOC120564167 NA coding upstream 41330 36465695 ~ 36489643 (+)
trnal-cag_1 NA coding upstream 67405 36463486 ~ 36463568 (+)
tgm2l LOC103363999,LOC104953692,LOC102308322 coding upstream 72862 36445093 ~ 36458111 (+)
exosc6 exosc6 coding upstream 99584 36429502 ~ 36431389 (+)
st3gal2 st3gal2,LOC102780992 coding upstream 140710 36368761 ~ 36390263 (+)
steep1 clg7hxorf56,csgr13hxorf56,LOC104938431,LOC101478835,LOC103368976 coding downstream 2219 36534215 ~ 36535887 (+)
nup93 nup93,LOC103368977 coding downstream 11772 36543768 ~ 36577859 (+)
zpd NA coding downstream 50898 36582894 ~ 36589156 (+)
mmp15a LOC103368972,LOC102304799,LOC104953712 coding downstream 64929 36596925 ~ 36621244 (+)
LOC120564181 LOC100709340,LOC102206288,LOC101464383,LOC102303471,LOC103368978 coding downstream 93902 36625898 ~ 36662806 (+)
G90241 aars,LOC102788534 non-coding upstream 130903 36397291 ~ 36400070 (+)
G90236 NA non-coding upstream 162543 36312714 ~ 36368430 (+)
G90238 NA non-coding upstream 172755 36352310 ~ 36358218 (+)
G90218 NA non-coding upstream 275407 36255175 ~ 36255566 (+)
G90217 NA non-coding upstream 276150 36254401 ~ 36254823 (+)
LOC120563368 NA non-coding downstream 62160 36594156 ~ 36595693 (+)
G90311 NA non-coding downstream 189929 36721925 ~ 36722827 (+)
G90523 NA non-coding downstream 1165768 37697764 ~ 37697977 (+)
G90575 NA non-coding downstream 1464564 37996560 ~ 37996773 (+)
LOC120564394 NA non-coding downstream 1520909 38052905 ~ 38054178 (+)
anapc13 anapc13 other upstream 13052 36516011 ~ 36517921 (+)
G90142 NA other upstream 745557 35784694 ~ 35785416 (+)
LOC120563677 gnao1,LOC103367675,LOC108249535,LOC107660763,LOC100693875 other upstream 1540561 34847563 ~ 34990412 (+)
G89836 NA other upstream 2095656 34434089 ~ 34435317 (+)
G89813 NA other upstream 2109792 34381836 ~ 34421181 (+)
wfdc1 wfdc1,LOC102778323 other downstream 1490381 38022377 ~ 38034694 (+)
G90583 NA other downstream 1522513 38054509 ~ 38055564 (+)
G90686 NA other downstream 2126370 38658366 ~ 38680087 (+)
G90693 NA other downstream 2345054 38877050 ~ 38879902 (+)
LOC120563436 NA other downstream 3339694 39871690 ~ 39874177 (+)

Expression


Co-expression Network