Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120563874 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053119.1 |
| NCBI id | CM020916.1 |
| chromosome length | 42187026 |
| location | 38131887 ~ 38133182 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU121918 | False | 387 | lncRNA | 0.42 | 2 | 38131892 | 38133126 |
| XR_005640021.1 | True | 448 | lncRNA | 0.40 | 2 | 38131887 | 38133182 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ndufa9a | ndufa9 | coding | upstream | 23800 | 38100538 ~ 38108087 (+) |
| dyrk4 | NA | coding | upstream | 32633 | 38084390 ~ 38099254 (+) |
| si:dkey-246g23.4 | NA | coding | upstream | 123982 | 37997385 ~ 38007905 (+) |
| kcng4a | kcng4,LOC102784647 | coding | upstream | 152570 | 37947589 ~ 37979317 (+) |
| si:dkey-246g23.2 | LOC100711201,LOC101469244,LOC102785219,LOC103353460,LOC102212915,LOC106536929 | coding | upstream | 224730 | 37815654 ~ 37907157 (+) |
| LOC120563882 | NA | coding | downstream | 77776 | 38210958 ~ 38245616 (+) |
| LOC120563875 | LOC102784361,LOC100689846 | coding | downstream | 139653 | 38272835 ~ 38287885 (+) |
| LOC120563880 | NA | coding | downstream | 227273 | 38360455 ~ 38361847 (+) |
| LOC120563876 | NA | coding | downstream | 291844 | 38425026 ~ 38436266 (+) |
| ribc2 | NA | coding | downstream | 303943 | 38437125 ~ 38441152 (+) |
| LOC120564394 | NA | non-coding | upstream | 77709 | 38052905 ~ 38054178 (+) |
| G90575 | NA | non-coding | upstream | 135114 | 37996560 ~ 37996773 (+) |
| G90523 | NA | non-coding | upstream | 433910 | 37697764 ~ 37697977 (+) |
| G90311 | NA | non-coding | upstream | 1409060 | 36721925 ~ 36722827 (+) |
| LOC120563368 | NA | non-coding | upstream | 1536194 | 36594156 ~ 36595693 (+) |
| G90624 | NA | non-coding | downstream | 136244 | 38269426 ~ 38272172 (+) |
| LOC120563884 | NA | non-coding | downstream | 169114 | 38302296 ~ 38303645 (+) |
| G90635 | NA | non-coding | downstream | 319620 | 38452802 ~ 38454316 (+) |
| G90655 | NA | non-coding | downstream | 419145 | 38552327 ~ 38555712 (+) |
| G90653 | wee2 | non-coding | downstream | 423475 | 38556657 ~ 38558151 (+) |
| G90583 | NA | other | upstream | 76323 | 38054509 ~ 38055564 (+) |
| wfdc1 | wfdc1,LOC102778323 | other | upstream | 97193 | 38022377 ~ 38034694 (+) |
| mt2 | NA | other | upstream | 1599891 | 36530973 ~ 36531996 (+) |
| anapc13 | anapc13 | other | upstream | 1613966 | 36516011 ~ 36517921 (+) |
| G90142 | NA | other | upstream | 2346471 | 35784694 ~ 35785416 (+) |
| G90686 | NA | other | downstream | 525184 | 38658366 ~ 38680087 (+) |
| G90693 | NA | other | downstream | 743868 | 38877050 ~ 38879902 (+) |
| LOC120563436 | NA | other | downstream | 1738508 | 39871690 ~ 39874177 (+) |
| LOC120564712 | LOC108250350,LOC108250755 | other | downstream | 2339666 | 40472848 ~ 40502827 (+) |
| gins3 | gins3 | other | downstream | 2569999 | 40703181 ~ 40710433 (+) |
