G90682


Basic Information

Item Value
gene id G90682
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 38616712 ~ 38622899 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU122018
CTTCTGTTCATTTGTCTCCTTATGGTCTGCGCTTCCTTCTTCGTTCCTGTGCTCACTTTCTATTTTAGTCCCACTGTCCTCGTTCTCAGTGTGGCTTTCTGTACcagtcctgtctgtctgtggaggTGATGAATGATCATCACTCTTTTCTGCGCTCCCGCACCCCATGTCTCCGTTTAGCAGCCCGTCGGTCTCTATCCTCACACTTTCATTGGTCCTCTCCGGGTTATCCTCCTTGTCCTTGTCCTGCTCCATCTGAGCTAGCACGCCGTTAGCCGCCGGTTTGGGGGCATCCTGCGGCGAGGTCGGTACGGACGAGTGGTTCTCCTGAGTCCTGTCGGCCTCCGTCTGCTTCGGGTAGACGCGGTGAGCCGGGCTGCCGTTGGGCGGCTTGTTGATCTGTTTGAGCGGCGAGCCGTCTCTCTtgtgctctgtgctgCTGTTCTCCTCAAAGTGGTTGATGAGGTCTAAGACTTTGGATGGTTtctcccctcttcctcttcctctt

Function

GO:

id name namespace
GO:0043292 contractile fiber cellular_component
GO:0044449 obsolete contractile fiber part cellular_component
GO:0036379 myofilament cellular_component
GO:0005865 striated muscle thin filament cellular_component
GO:0030016 myofibril cellular_component
GO:0030017 sarcomere cellular_component
GO:0016907 G protein-coupled acetylcholine receptor activity molecular_function
GO:0015464 acetylcholine receptor activity molecular_function

KEGG:

id description
ko04020 Calcium signaling pathway
ko04970 Salivary secretion

RNA

RNA id representative length rna type GC content exon number start site end site
TU122018 True 508 lncRNA 0.55 3 38616712 38622899

Neighbor

gene id symbol gene type direction distance location
nup205 nup205 coding upstream 9860 38582874 ~ 38606852 (+)
dennd11 kiaa1147 coding upstream 46088 38563908 ~ 38570624 (+)
bcl2l13 bcl2l13 coding upstream 69214 38529277 ~ 38547498 (+)
slc25a18 slc25a18,LOC102783608,LOC106926152 coding upstream 100109 38505926 ~ 38516603 (+)
ribc2 NA coding upstream 175560 38437125 ~ 38441152 (+)
zgc:110789 LOC104944311,LOC103365863,LOC100700474 coding downstream 102608 38725507 ~ 38740297 (+)
LOC120564709 klhl25,LOC102204243,LOC100689762 coding downstream 121989 38744888 ~ 38768574 (+)
LOC120564171 LOC102799927 coding downstream 274655 38897554 ~ 39018785 (+)
pard6a pard6a,LOC103379842 coding downstream 637490 39260389 ~ 39288227 (+)
LOC120564312 NA coding downstream 781651 39404550 ~ 39411863 (+)
G90674 agk non-coding upstream 37683 38575361 ~ 38579029 (+)
G90653 wee2 non-coding upstream 58561 38556657 ~ 38558151 (+)
G90655 NA non-coding upstream 61000 38552327 ~ 38555712 (+)
G90635 NA non-coding upstream 162396 38452802 ~ 38454316 (+)
LOC120563884 NA non-coding upstream 313067 38302296 ~ 38303645 (+)
G90685 NA non-coding downstream 31121 38654020 ~ 38665353 (+)
G90692 NA non-coding downstream 64585 38687484 ~ 38692021 (+)
G90703 NA non-coding downstream 118015 38740914 ~ 38743012 (+)
G90706 NA non-coding downstream 166009 38788908 ~ 38789350 (+)
G90694 NA non-coding downstream 167224 38790123 ~ 38790679 (+)
G90583 NA other upstream 561148 38054509 ~ 38055564 (+)
wfdc1 wfdc1,LOC102778323 other upstream 582018 38022377 ~ 38034694 (+)
mt2 NA other upstream 2084716 36530973 ~ 36531996 (+)
anapc13 anapc13 other upstream 2098791 36516011 ~ 36517921 (+)
G90142 NA other upstream 2831296 35784694 ~ 35785416 (+)
G90686 NA other downstream 35467 38658366 ~ 38680087 (+)
G90693 NA other downstream 254151 38877050 ~ 38879902 (+)
LOC120563436 NA other downstream 1248791 39871690 ~ 39874177 (+)
LOC120564712 LOC108250350,LOC108250755 other downstream 1849949 40472848 ~ 40502827 (+)
gins3 gins3 other downstream 2080282 40703181 ~ 40710433 (+)

Expression


Co-expression Network