G91292 (LOC107389246,LOC100694841)


Basic Information

Item Value
gene id G91292
gene name LOC107389246,LOC100694841
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 40526743 ~ 40533217 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU122835
CTCCTGTGGCAGGTTGTAGCTGAGCAGGCGGTTGAAGCGACGCAGGTGTGACTCTCTGGTGAAGTTCAGCCTCATGACCTGGTTCAGGTACTTGTCCATAGTTCCAAACAGCCACTTGGGTTCCTTGTTGAAGGGCATCCTCATTCCATGAAACTTGGCCATCTTCTCTGCAACCTCCGCCGAGATGCTGGGCTCGCTTAACTCACAGGTGTCAAGTTTACGACTGGGGACATACTGCTCCAGTCGGCCCTGAGGGAAAATACCGTAGAGTTTCGGTCCCAGCTCCCTTTCTGCCAAGATGGCAAACATCACACTCTCCAAAACCATGGCCTCCGCCccctgaaaacacacaacagtAAAAAACGTAGCCTAACATTTAAAGTGTGAGGAACACTACCCGCCAGTGCTGCAAAATGGAAAGAGAACAGAATGAGAAATGAGACAAAGAGCTTTTTCTGGTCTCTATGTCTAAAAACATGAAAGTTAGAGTGAGGTAAAGAAGCAATTCTCTTGTCAGCCCCATTCAGACCGTCAATGTGTAACAGTGCATGGTTCATGTTAAAGTAATGACTTTTGCTCATGCTCTACAATTTGACTGCTCTGCATTCAGAATTGAATAGAAATTAGGGGGTGGAGGAGAAGAATGGGGGAGTCTGAAGAGAAATGCTGCGGTAAGGGTTAGTTGGGTTTACCAGTGAGAAGAAACCATTGACTACAAAAATAGTGAACGTAGCATTtgtgacatcacccattggtttgtggaccgCCGTTTTGAAGCCTCGCGTTTGGCAATTTAGACGTTGCCACCTTGGTTTTTCGTACCGGACGTGCCGATTTTTGACGAGAGTGTGGAGCTGGAGGAGGATGATGCAGCCAAGCCAGTGTTCTTAGTGGCTGCAATGGTGCTGTGCCAGTCTaaatgctaaagagggaaagttgcagattttcaacccttcgGAAGCCagtcatccagtggagatttACCGGCGGATAAATGCGGACCTACTGGTACTGGAgccgttcatctgcatgtacggtgTACAaaagttaccagctaatgctagcagTGGCTAGATAGCTTGGTTGGAAGaatgctgaacaagacatttttaggcgaccaaaatgttccaatcaactttgatgaagtgaaaacacacagtgagagggtcatcATTTAAAATAAGCCTCGGTCACGTTGACAGGTCGGCGTGTAACCACGCCACTAATGCAatccctgctttatcgtctattttcAAATAAATGGGGCCATAATCTACTGAATGAACACCATGCTGttttgaagaagacttgaaagtgGCGATTGAGACCTTAACATGTTAAAAATTgcttactgaggtaataaactCAGAGCACCAGTCACTGTTGAAGTTGGTGAAGCAGAGAGGACAACCTTGTCTTTCTCCCTTTATCTTAGAGACACACAAACGTggcacaccaacacacacacagcctggaGTCCAACAAGGGCTCAAGGTTAACTGGGAAACCTTCTCTCATACCAACACAAACACGTGCCCTGGAGCCTGAAGCACTAAATCTGTGTGCTGGCTACTCATCGATTTGATTCTGATTCACTCTATTGtgtggaaaaagacagaaaaccatGGCTTCTCGCCAAATAGGCAGGAGGTCATTGGCAGAGGAGAGATTTATACCGTGGGAAACTTAAACCCTGATTAGTGAAATTGTATTTCTAACGGCATCTCTTTGGGTCAATGTTGCAATGAACACAGAAATAGGTTCACCAATTGAGTTGAGAGGATTCAACGAAGCATTAAACCAAAAATGATTACGTATTAGTTCAATTCAAACTAAGAGCaagcagctagctagccaaaACGTtagtcatttattttattaatgttttgaCTAGAGTTCCTTATAGTTGctagttattaaaaaaaaggcctGTTTAAAACTTTCTCCAGAAAGTTTTGTCTTGGTTTAACTCAAACAATAAGAACATAACTGCCTCAGGATGAGCTCTGGCTctaaaacaaatatttacaaTAAAGTTATGCCAATATATTTCCAACTGAAATTTCAATATCGATCTTTAAAAGTGTACCTAGAGTTGTCAAATGAGTAATCCCCAT

Function

NR:

description
PREDICTED: choline kinase alpha-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122835 True 2117 lncRNA 0.44 3 40526743 40533217

Neighbor

gene id symbol gene type direction distance location
LOC120564785 NA coding upstream 112263 40402108 ~ 40414480 (+)
LOC120564733 NA coding upstream 125792 40376300 ~ 40400951 (+)
dnajc24 dnajc24 coding upstream 249548 40270523 ~ 40277195 (+)
LOC120564391 NA coding upstream 551763 39973618 ~ 39974980 (+)
ric8a ric8a coding upstream 563335 39944716 ~ 39963408 (+)
si:dkey-12e7.1 LOC104959053,LOC107389248,LOC106903666,LOC100708592,LOC101482187 coding downstream 16031 40549248 ~ 40557864 (+)
anpepa NA coding downstream 26074 40559291 ~ 40586148 (+)
ldhd ldhd coding downstream 80299 40613516 ~ 40633735 (+)
znrf1 znrf1 coding downstream 102908 40636125 ~ 40700282 (+)
ndrg4 ndrg4,LOC102790713 coding downstream 197542 40730759 ~ 40802151 (+)
G91288 NA non-coding upstream 6956 40518365 ~ 40519787 (+)
G91286 NA non-coding upstream 17395 40508732 ~ 40509348 (+)
G91285 NA non-coding upstream 18035 40508138 ~ 40508708 (+)
G91284 NA non-coding upstream 19449 40507057 ~ 40507294 (+)
G91280 NA non-coding upstream 23549 40502983 ~ 40503194 (+)
G91358 NA non-coding downstream 179527 40712744 ~ 40712954 (+)
G91363 NA non-coding downstream 193929 40727146 ~ 40727418 (+)
G91383 NA non-coding downstream 309861 40843078 ~ 40860888 (+)
G91451 NA non-coding downstream 677287 41210504 ~ 41211799 (+)
G91465 NA non-coding downstream 805753 41338970 ~ 41339360 (+)
LOC120564712 LOC108250350,LOC108250755 other upstream 23916 40472848 ~ 40502827 (+)
LOC120563436 NA other upstream 652566 39871690 ~ 39874177 (+)
G90693 NA other upstream 1646841 38877050 ~ 38879902 (+)
G90686 NA other upstream 1846656 38658366 ~ 38680087 (+)
G90583 NA other upstream 2471179 38054509 ~ 38055564 (+)
gins3 gins3 other downstream 169964 40703181 ~ 40710433 (+)
smpd3 smpd3,LOC102789354 other downstream 334504 40867721 ~ 40950165 (+)
LOC120563418 LOC101477895,LOC102304763,LOC106675229,LOC102199463 other downstream 420289 40953506 ~ 40955947 (+)
exoc3l1 LOC106535935,LOC103369297,LOC103466291,LOC104962074,LOC101469518 other downstream 521173 41054390 ~ 41078222 (+)
LOC120564397 NA other downstream 932447 41465664 ~ 41467325 (+)

Expression


Co-expression Network