LOC120564397


Basic Information

Item Value
gene id LOC120564397
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 41465664 ~ 41467325 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU123237
CTTCAGACAGCAAAGACTGAAGAGCATCATCCCTCTACACACAGAAGGACACAGGACAGGATGAAGACTCTGAGCTTTACCGGGGGactcctgctgctgctcctcaccATTTACTCCTGCACTGCCATGCCTCATGCGGTGAATCCTGTGTCGTGCTGCGTTCGATTCTTTACAGGAAGGGTGCCGCAGCCGCAAATCATCTCCATCATCAAGACTGACAGCAGCTGTCGCGAAAAGGCATTTGTGGTCAGTACTGCCAAAGGGATGGATATCTGCGTGAGCCAGAATCTGGGCTGGGCTCAGAGAGCTTTCAACCAACAGCAAGTCATCAAGGACCAATGATACTGTAGTCCTCATGATCAAACATCTCCAGCTACTCAACCTCCAGCCATCGTAGAGCTCTGTCTCTATGATCTTTTTATTAtaatgaaaacatatttttccATGAAGCTTTGCACTGTGAACTTTCATGCAGCTATTTTCATTCCTGTAATGATCTTTCTCATGTCTAAAAGTTAACGCAAAACATGTCATTATTTAGAAGAGGTCACAAAACAGCCAGTCAGTCAATAAGGGCCTTGTAAGTGCATCATTCGTCACAGGGAATACATGAATGATGAATAAATTAATTTGACA
>XM_039809310.1
TATAAGCAGCTATAAGACACATAGTGATCAGAGCAGATCACTTCAGACAGCAAAGACTGAAGAGCATCATCCCTCTACACACAGAAGGACACAGGACAGGATGAAGACTCTGAGCTTTACCGGGGGactcctgctgctgctcctcaccATTTACTCCTGCACTGCCATGCCTCATGCGGTGAATCCTGTGTCGTGCTGCGTTCGATTCTTTACAGGAAGGGTGCCGCAGCCGCAAATCATCTCCATCATCAAGACTGACAGCAGCTGTCGCGAAAAGGCATTTGTGGTCAGTACTGCCAAAGGGATGGATATCTGCGTGAGCCAGAATCTGGGCTGGGCTCAGAGAGCTTTCAACCAACAGCAAGTCATCAAGGACCAATGATACTGTAGTCCTCATGATCAAACATCTCCAGCTACTCAACCTCCAGCCATCGTAGAGCTCTGTCTCTATGATCTTTTTATTAtaatgaaaacatatttttccATGAAGCTTTGCACTGTGAACTTTCATGCAGCTATTTTCATTCCTGTAATGATCTTTCTCATGTCTAAAAGTTAACGCAAAACATGTCATTATTTAGAAGAGGTCACAAAACAGCCAGTCAGTCAATAAGGGCCTTGTAAGTGCATCATTCGTCACAGGGAATACATGAATGATGAATAAATTAATTTGACACACCCCAA

Function

GO:

id name namespace
GO:0050896 response to stimulus biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123237 False 636 TUCP 0.45 3 41465704 41467317
XM_039809310.1 True 684 mRNA 0.45 3 41465664 41467325

Neighbor

gene id symbol gene type direction distance location
LOC120564315 NA coding upstream 5183 41459633 ~ 41460481 (+)
LOC120564366 fanca coding upstream 23982 41413915 ~ 41441682 (+)
slc10a3 LOC104954733,LOC100690979,LOC101468339,LOC102207614 coding upstream 56899 41406126 ~ 41408765 (+)
chmp1a chmp1a,LOC102798084 coding upstream 67855 41389815 ~ 41397809 (+)
vps4a vps4a,LOC106939979 coding upstream 123771 41329242 ~ 41341893 (+)
spata2l NA coding downstream 43648 41510973 ~ 41516870 (+)
LOC120564437 NA coding downstream 53421 41520746 ~ 41531671 (+)
tat tat coding downstream 72852 41540177 ~ 41552179 (+)
zgc:56622 LOC102206997,LOC103365987,LOC101480675,LOC100696953,LOC102298364 coding downstream 85267 41552592 ~ 41564781 (+)
cotl1 cotl1 coding downstream 110853 41578178 ~ 41588578 (+)
G91465 NA non-coding upstream 126304 41338970 ~ 41339360 (+)
G91451 NA non-coding upstream 253865 41210504 ~ 41211799 (+)
G91383 NA non-coding upstream 604776 40843078 ~ 40860888 (+)
G91363 NA non-coding upstream 738246 40727146 ~ 40727418 (+)
G91358 NA non-coding upstream 752710 40712744 ~ 40712954 (+)
G91614 NA non-coding downstream 97758 41565083 ~ 41566409 (+)
G91625 NA non-coding downstream 121317 41588642 ~ 41676049 (+)
G91641 NA non-coding downstream 274860 41742185 ~ 41745030 (+)
G91648 NA non-coding downstream 285123 41752448 ~ 41752809 (+)
G91731 NA non-coding downstream 326226 41793551 ~ 41801340 (+)
exoc3l1 LOC106535935,LOC103369297,LOC103466291,LOC104962074,LOC101469518 other upstream 387442 41054390 ~ 41078222 (+)
LOC120563418 LOC101477895,LOC102304763,LOC106675229,LOC102199463 other upstream 509717 40953506 ~ 40955947 (+)
smpd3 smpd3,LOC102789354 other upstream 515499 40867721 ~ 40950165 (+)
gins3 gins3 other upstream 755231 40703181 ~ 40710433 (+)
LOC120564712 LOC108250350,LOC108250755 other upstream 962837 40472848 ~ 40502827 (+)
vps9d1 vps9d1 other downstream 1918 41469243 ~ 41496536 (+)
plcg2 plcg2 other downstream 157788 41625113 ~ 41667528 (+)
G91634 NA other downstream 225199 41692524 ~ 41732835 (+)
zfpm1 zfpm1 other downstream 407893 41875218 ~ 42014502 (+)

Expression


Co-expression Network