LOC120563875 (LOC102784361,LOC100689846)


Basic Information

Item Value
gene id LOC120563875
gene name LOC102784361,LOC100689846
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 38272835 ~ 38287885 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808351.1
CATAAACACATGCCACTTGTCTGGTTGACGCCGTCAGTTCAGTATCCTGGTCTAAGGTCGCTACGCGCGCGTCTTTCAAGGTTTTCCATTCCCTTGCTGGGGGTTCAGTCTGTGCGCTATCACTATGAGAGTGTCGTTGAAGCGGTCAATCGTCATACTGGGGGGGATCGGGCTCCTCGTCTATGTGGGCGTGTTTCTAAAGGGTGGACATGAGCCTGAGACTGACAAACAGCTGGACACACCGCGTATGATCCGGAGTTTTTCTGACCTGGAGACAAACATCAGCAATCTCCACAATGTAGTCAGAGCTTTTGAGAAAAAGCAGGACACCATGCAGAAAATGCTGGAAGAGGACAGACTCAGATGGAGAAAAGCTGCAGAGGACAAACAGCCAACTGTCAAAACACAGCCAGAGCAGAAAGAGAAACCTGAAGCAAAAATCCCAGACCAAAAGGAGACTCCTCAAGAGAAAAAGTCTAATAAACTGTTTCCCAACTCTGCCCTGTTCAAGACGTGGGGGGAGAATCTCTCGGAGGATGACCAAAGAGAGGCACAAGCTTTGTTTGAAAAGTATGGATACAACGTTTTTCTAAGCGATCGCCTTCCTCTAGATCGAGCTCTTCCAGATACCAGGGATCCAAGGTGTCTGAAAAAGAGTTACCCAGAAGACTTACCAAATATTGGAGTAGTGTTGATCTACCTGAATGAGGCCCTGTCTATTATCAAAAGAGCTATGCGCAGCATCATTGACCGCACCCCTAAACACCTGCTGAAGGAGATCATATTGGTGGATGACAATAGCTCTGAAGAAAACCTGAAGGGTGACCTTGATATGTACGTGAAGTCGCTCGAGCAGGAGAACCCAAGTCTCGCTATCATAAGGGTGAGGAACAATGTGTCATATGGCCTGTCTCACGCCAGGGCGTCTGGCTGGAGGGCTGCTACTGCGGACGTGGTGGCCATCCTGGATGCGCACATCGAAGTCCATGAGCTGTGGGCGGAACCCCTGCTGACGCAGATCAAGGCTGACCGAACGGTGGTGACGTCCCCTGTGTTTGACAAAGTACTCTTTGATGACCTCAAGGTTATTCCATACCAGCCAGCATCCCACGCCTTCGACTGGGCTTTATGGTGCATGTATGAGAGCTTTTCGGACGAGTATTACAAACTCAATGACGGCTCGTTGCCTGGAAAAAGTCCATCTGTCATGGGGATCCTAGTTGCTGAAAGAAAGTATCTGGGAGAAATCGGACTCCTCGATGAAGGAATGAAAGTGTACGGTGGAGAAAACGTTGAGCTGGGAATTCGAGTGTGGACATGTGGAGGCAGTATTGAAGTAGTTCCATGCTCCAAGATCGCCCACATTGAGAGGAACCACAAGCCCTACATGCCTGACCTGAGCAAAGCCATGAAGAGAAACGCCCTGAGGGTAGCAGAAGTCTGGATGGATGAATACAAACACAACGTCAACTTGGCTTGGAACTTGCCGTTTGAGAATCACGGAATTGACATTGGGGATATCTCTGAAAGGAAAAAACTCAGGGAAAGGTTGAACTGTAAACCTTTCAAATGGTACCTGGAAAATGTGTATCCCAAGTTGGATCCCTTGACTAACCTAGTTGCCTATGGAGGAATAAGGAATCTTGATGCTGACCAGTGCATAGACCAAGGACCAGTACCAGGTCACACACCCATTGCCTACAATTGCTACTACTATGGACCTCAAatgtgTTATTATCGTTCAAGCGGTGAGCTCTATATCGGCGGCATCAAATCCCACAAGTACAATGACAACCAGTGTTTAACTGACCCGGGGAAAAAAGAAACGGAACCTGGCCTTCATAACTGCAAAGAGGCTAAGCAGAAAGGAATGGGGATTCACTGGGACTTCACTCAGGGAAAAGAACTGAAGAACAGAGATACAAAAAGATGTCTGGAGATTAAGAATGGCGTGCTTCTAATACAGGAATGCTCTGGCCAAAGATGGGAAATCCAGCACCTAATCAAAGCCTTTTAAAGTGTGCGGTGGTGCGTATTTCCGAATTtctgaggaaggagagaggctGGGTCCAAATGaagacttaaagtgatggttcggagtaatttcaccctagggt

Function

NR:

description
PREDICTED: probable polypeptide N-acetylgalactosaminyltransferase 8-like

GO: NA

KEGG:

id description
K00710 GALNT; polypeptide N-acetylgalactosaminyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808351.1 True 2117 mRNA 0.48 11 38272835 38287885

Neighbor

gene id symbol gene type direction distance location
LOC120563882 NA coding upstream 27219 38210958 ~ 38245616 (+)
ndufa9a ndufa9 coding upstream 164748 38100538 ~ 38108087 (+)
dyrk4 NA coding upstream 173581 38084390 ~ 38099254 (+)
si:dkey-246g23.4 NA coding upstream 264930 37997385 ~ 38007905 (+)
kcng4a kcng4,LOC102784647 coding upstream 293518 37947589 ~ 37979317 (+)
LOC120563880 NA coding downstream 72570 38360455 ~ 38361847 (+)
LOC120563876 NA coding downstream 137141 38425026 ~ 38436266 (+)
ribc2 NA coding downstream 149240 38437125 ~ 38441152 (+)
slc25a18 slc25a18,LOC102783608,LOC106926152 coding downstream 218041 38505926 ~ 38516603 (+)
bcl2l13 bcl2l13 coding downstream 241392 38529277 ~ 38547498 (+)
G90624 NA non-coding upstream 663 38269426 ~ 38272172 (+)
LOC120563874 NA non-coding upstream 139653 38131887 ~ 38133182 (+)
LOC120564394 NA non-coding upstream 218657 38052905 ~ 38054178 (+)
G90575 NA non-coding upstream 276062 37996560 ~ 37996773 (+)
G90523 NA non-coding upstream 574858 37697764 ~ 37697977 (+)
LOC120563884 NA non-coding downstream 14411 38302296 ~ 38303645 (+)
G90635 NA non-coding downstream 164917 38452802 ~ 38454316 (+)
G90655 NA non-coding downstream 264442 38552327 ~ 38555712 (+)
G90653 wee2 non-coding downstream 268772 38556657 ~ 38558151 (+)
G90674 agk non-coding downstream 287476 38575361 ~ 38579029 (+)
G90583 NA other upstream 217271 38054509 ~ 38055564 (+)
wfdc1 wfdc1,LOC102778323 other upstream 238141 38022377 ~ 38034694 (+)
mt2 NA other upstream 1740839 36530973 ~ 36531996 (+)
anapc13 anapc13 other upstream 1754914 36516011 ~ 36517921 (+)
G90142 NA other upstream 2487419 35784694 ~ 35785416 (+)
G90686 NA other downstream 370481 38658366 ~ 38680087 (+)
G90693 NA other downstream 589165 38877050 ~ 38879902 (+)
LOC120563436 NA other downstream 1583805 39871690 ~ 39874177 (+)
LOC120564712 LOC108250350,LOC108250755 other downstream 2184963 40472848 ~ 40502827 (+)
gins3 gins3 other downstream 2415296 40703181 ~ 40710433 (+)

Expression


Co-expression Network