LOC120563876


Basic Information

Item Value
gene id LOC120563876
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 38425026 ~ 38436266 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808353.1
TCATACACACATGCCACTTGTCTGGTTGACGCCGTCAGCCCAGTAGTCAGGGCGCGCGTCTTTCAAGGTTTTCCATTCCCTTGCTGGGGGTTCAGTCTGTGCGCTATCACTATGAGAGCAGTGTGGTTGAAGCGGTCGATCGTCATACTGGGGGGGATCGGGCTCCTCGTCTACGTTGGCATGTTTCTAAAGGGTGGACAAGAGCCTGACAAACATCTGGAGACAAGCATCAACAATCTTCACAATGTAGTCAGAGCTTTTGAGAAAAAGCAGGACACCATGCAGAAAATGCTGGAAGAGGACAGACTCAGATGGAGAAAAGCTGCAGAGGTCGAACAGCCAACTGTCAAAACACAGCCAGAGCAGAAAGAGAAACCTGAAGCAAAAATCCCGGACCAAAAGGAGACTCCTCAAGAGAAAAAGTCTAATAAACTGTTTCCCAACTCTGCCCTGTTCAAGACGTGGGGGGAGAATCTCTCGGAGGATGACCAAAGAGAGGCACAGGATTTGTTTGTCAAGTATGGATACAACGTTTTTCTCAGTGATCGCCTTCCTCTAGATCGAGCTCTTCCAGATACCAGGGATCCAAGGTGTCTGAAAAAGAGTTACCCAGAAGACTTACCAAATATTGGAGTAGTGTTGATCTACCTGAATGAGGCCCTGTCTATTATTAAAAGAGCTATGCGCAGCATCATTGACCGCACCCCTAAACACCTGCTGAAGGAGATCATATTGGTGGATGACAATAGCTCTGAAGAAAACCTGAAGGGTGACCTTGACTTGTACGTGAAGTCGATCGAGCAGGAGAACCCAAGTCTCGCTATCATAAGGGTGAGGAACAATGTGTCATATGGCCTGTCTCACGCCAGGGCGTCTGGCTGGAGGGCTGCTACTGCGGACGTGGTGGCCATCCTGGATGCACACATCGAAGTCCATGAGCTGTGGGCGGAACCCCTGCTGACCCAGATCAAGGCTGACCGAACAGTGGTGACGTCCCCTGTGTTTGACAAAGTACTCTTTGATGACCTCAAGGTTATTCCATACCAGCCAGCATCACACGCCTTCGACTGGGCTTTATGGTGCATGTATGAGAGTTTTTCGGACGAGTATTACAAACTCAATGACGGCTCGTTGCCTGGAAAaagTCCATCTGTCATGGGGATCCTAGTTGCTGAAAGAAAGTATCTGGGAGAAGTCGGACTTCTCGATGAAGGAATGAAAGTGTACGGTGGAGAAAATGTTGAGCTGGGAATTCGAGTTTGGACATGTGGAGGCAGTATTGAAGTAGTTCCATGCTCCAAGATCGCCCACATTGAGAGGAACCACAAGCCCTACATGCCTGACCTGAGCAAAGCCATGAAGAGAAACGCCCTGAGGGTAGCAGAAGTCTGGATGGATGAATACAAACACAACGTCAACTTGGCTTGGAACTTGCCGTTTGAGAATCACGGAATTGACATTGGGGATATCTCTGAAAGGAAAAAACTCAGGGAAAGGTTGAACTGTAAACCTTTCAAATGGTACCTGGAAAATGTGTATCCCAAGTTGGATCCCTTGACTAACCTAGTTGCCTATGGAGGAATAAGGAATCTTGATGCTGACCAGTGCATAGACCAAGGACCAGTGCCAGGTCACACACCCATTGCCTACAATTGCTACTACTATGGACCTCAAatgtgTTATTATCGGACAAGCGGTGAGCTCTATATCGGCGGCATCAAGTCCCACAAGTACAATGACAACCGGTGTTTAAGTGACCTGGGGAAAAAAGAAACGGAGCCTGGCCTTCATAACTGCAAAGAGGCTAAGCAGAAAGGAATGGGGATTCACTGGGACTTCACTCAGGGCAAAGAACTGAAGAACAGAGATACAAAAAGATGTCTGGAGATTAAGAATGGCGTGCTTCTAATACAGGAATGCTCTGGCCAAAGATGGGAAATCCAAAACATAATCAAAGCCTTTTAAAGTGTACGGCCAACAAGAAGTCCACTCCTCTGCTCATTGGTCAGTGAATAATATCCCCTGATTGTGTAAAATGGACATTTGCTCAATAGTTTATGAATGGACAAAGTCATTATTTGTACAATTTGTTATTatgccaattaaaaaaaaatgaatttgtaAAAAGTGA
>XM_039808354.1
TCATACACACATGCCACTTGTCTGGTTGACGCCGTCAGCCCAGTAGTCAGGGCGCGCGTCTTTCAAGGTTTTCCATTCCCTTGCTGGGGGTTCAGTCTGTGCGCTATCACTATGAGAGCAGTGTGGTTGAAGCGGTCGATCGTCATACTGGGGGGGATCGGGCTCCTCGTCTACGTTGGCATGTTTCTAAAGGGTGGACAAGAGCCTGACAAACATCTGGAGACAAGCATCAACAATCTTCACAATGTAGTCAGAGCTTTTGAGAAAAAGCAGGACACCATGCAGAAAATGCTGGAAGAGGACAGACTCAGATGGAGAAAAGCTGCAGAGGTCGAACAGCCAACTGTCAAAACACAGCCAGAGCAGAAAGAGAAACCTGAAGCAAAAATCCCGGACCAAAAGGAGACTCCTCAAGAGAAAAAGTCTAATAAACTGTTTCCCAACTCTGCCCTGTTCAAGACGTGGGGGGAGAATCTCTCGGAGGATGACCAAAGAGAGGCACAGGATTTGTTTGTCAAGTATGGATACAACGTTTTTCTCAGTGATCGCCTTCCTCTAGATCGAGCTCTTCCAGATACCAGGGATCCAAGGTGTCTGAAAAAGAGTTACCCAGAAGACTTACCAAATATTGGAGTAGTGTTGATCTACCTGAATGAGGCCCTGTCTATTATTAAAAGAGCTATGCGCAGCATCATTGACCGCACCCCTAAACACCTGCTGAAGGAGATCATATTGGTGGATGACAATAGCTCTGAAGAAAACCTGAAGGGTGACCTTGACTTGTACGTGAAGTCGATCGAGCAGGAGAACCCAAGTCTCGCTATCATAAGGGTGAGGAACAATGTGTCATATGGCCTGTCTCACGCCAGGGCGTCTGGCTGGAGGGCTGCTACTGCGGACGTGGTGGCCATCCTGGATGCACACATCGAAGTCCATGAGCTGTGGGCGGAACCCCTGCTGACCCAGATCAAGGCTGACCGAACAGTGGTGACGTCCCCTGTGTTTGACAAAGTACTCTTTGATGACCTCAAGGTTATTCCATACCAGCCAGCATCACACGCCTTCGACTGGGCTTTATGGTGCATGTATGAGAGTTTTTCGGACGAGTATTACAAACTCAATGACGGCTCGTTGCCTGGAAAaagTCCATCTGTCATGGGGATCCTAGTTGCTGAAAGAAAGTATCTGGGAGAAGTCGGACTTCTCGATGAAGGAATGAAAGTGTACGGTGGAGAAAATGTTGAGCTGGGAATTCGAGTTTGGACATGTGGAGGCAGTATTGAAGTAGTTCCATGCTCCAAGATCGCCCACATTGAGAGGAACCACAAGCCCTACATGCCTGACCTGAGCAAAGCCATGAAGAGAAACGCCCTGAGGGTAGCAGAAGTCTGGATGGATGAATACAAACACAACGTCAACTTGGCTTGGAACTTGCCGTTTGAGAATCACGGAATTGACATTGGGGATATCTCTGAAAGGAAAAAACTCAGGGAAAGGTTGAACTGTAAACCTTTCAAATGGTACCTGGAAAATGTGTATCCCAAGTTGGATCCCTTGACTAACCTAGTTGCCTATGGAGGAATAAGGAATCTTGATGCTGACCAGTGCATAGACCAAGGACCAGTGCCAGGTCACACACCCATTGCCTACAATTGCTACTACTATGGACCTCAAatgtgTTATTATCGGACAAGCGGTGAGCTCTATATCGGCGGCATCAAGTCCCACAAGTACAATGACAACCGGTGTTTAAGTGACCTGGGGAAAAAAGAAACGGAGCCTGGCCTTCATAACTGCAAAGAGGCTAAGCAGAAAGGAATGGGGATTCACTGGGACTTCACTCAGGGCAAAGAACTGAAGAACAGAGATACAAAAAGATGTCTGGAGATTAAGAATGGCGTGCTTCTAATACAGGAATGCTCTGGCCAAAGATGGGAAATCCAAAACATAATCAAAGCCTTTTAAAGTGTACGGCCAACAAGAAGTCCACTCCTCTGCTCATTGAAATAGCCTCCATGCAGAGAAAGGCAAACAAATCATAAGCGGATGGAAAAGTAAAGAAGAAAAGGACAACGATGGTATAAAAAGCATGATTCAGAAAACAAAGTGTTTCATAGATGAGTGATATAGTACAGAGGTCTAACAACGGTTACTGAATTATGGGTTCGTGCCAAAGTTGAGAACCAAGCCTCCTTAAACAAATACTCCTTTATGGTTTGACTGGTTTGATTGGATTCCCTAATCAGTTTTAAACTGTTGTTGTTAGTACTTTTGTAGTTCTGATTATTAGAAAGATACAGTACAACTTGTTCAGACGTCTAATGTTGTTGGAAATGTATTGTAATTGTGGGTTGTGCGTTCTGGCTAGGCTAGATGACACATGCAAATACTATGCAATCATTGGAGGTGTGGCTGGGTGCCTTAACATAGTCCAAAACAAAGGTCCCACTTATGCAGAATGTATGGTACTGTGTATTACCTAATTATTATAGTGTCAAGAAAAGCGATAACCATATTTGGGACTTAGTTATGGATTTTACAGGCCATGGGGGTTGGTATTGCAGGCCAACAGAGTTTTGTTTGAAATAATGTCAAATATTGATCATTGTTTTTTATCATTTGGAAATAAAGTGTATATATAAAActg

Function

GO: NA

KEGG:

id description
K00710 GALNT; polypeptide N-acetylgalactosaminyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808353.1 False 2131 mRNA 0.47 11 38425026 38432945
XM_039808354.1 True 2647 mRNA 0.45 12 38425026 38436266

Neighbor

gene id symbol gene type direction distance location
LOC120563880 NA coding upstream 63179 38360455 ~ 38361847 (+)
LOC120563875 LOC102784361,LOC100689846 coding upstream 137141 38272835 ~ 38287885 (+)
LOC120563882 NA coding upstream 179410 38210958 ~ 38245616 (+)
ndufa9a ndufa9 coding upstream 316939 38100538 ~ 38108087 (+)
dyrk4 NA coding upstream 325772 38084390 ~ 38099254 (+)
ribc2 NA coding downstream 859 38437125 ~ 38441152 (+)
slc25a18 slc25a18,LOC102783608,LOC106926152 coding downstream 69660 38505926 ~ 38516603 (+)
bcl2l13 bcl2l13 coding downstream 93011 38529277 ~ 38547498 (+)
dennd11 kiaa1147 coding downstream 127642 38563908 ~ 38570624 (+)
nup205 nup205 coding downstream 146608 38582874 ~ 38606852 (+)
LOC120563884 NA non-coding upstream 121381 38302296 ~ 38303645 (+)
G90624 NA non-coding upstream 152854 38269426 ~ 38272172 (+)
LOC120563874 NA non-coding upstream 291844 38131887 ~ 38133182 (+)
LOC120564394 NA non-coding upstream 370848 38052905 ~ 38054178 (+)
G90575 NA non-coding upstream 428253 37996560 ~ 37996773 (+)
G90635 NA non-coding downstream 16536 38452802 ~ 38454316 (+)
G90655 NA non-coding downstream 116061 38552327 ~ 38555712 (+)
G90653 wee2 non-coding downstream 120391 38556657 ~ 38558151 (+)
G90674 agk non-coding downstream 139095 38575361 ~ 38579029 (+)
G90682 NA non-coding downstream 180446 38616712 ~ 38622899 (+)
G90583 NA other upstream 369462 38054509 ~ 38055564 (+)
wfdc1 wfdc1,LOC102778323 other upstream 390332 38022377 ~ 38034694 (+)
mt2 NA other upstream 1893030 36530973 ~ 36531996 (+)
anapc13 anapc13 other upstream 1907105 36516011 ~ 36517921 (+)
G90142 NA other upstream 2639610 35784694 ~ 35785416 (+)
G90686 NA other downstream 222100 38658366 ~ 38680087 (+)
G90693 NA other downstream 440784 38877050 ~ 38879902 (+)
LOC120563436 NA other downstream 1435424 39871690 ~ 39874177 (+)
LOC120564712 LOC108250350,LOC108250755 other downstream 2036582 40472848 ~ 40502827 (+)
gins3 gins3 other downstream 2266915 40703181 ~ 40710433 (+)

Expression


Co-expression Network