LOC120563882


Basic Information

Item Value
gene id LOC120563882
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 38210958 ~ 38245616 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808361.1
acttagttacattccaccactgcctgtATTGCTCCTGACTGCACCCAACACATGAAGAAAAGGAATCCAGCAagctatatataaaaaagaaggggaaaaaaagcttaaCTGCCCTCTCTACCTTCTCACAGTTTACCCTAAAAGTTTTCTTTATGCGTCAATGTGTTGTAAGAACttattataatacattttccTTCAGCTGCAGTTCCGACACAGTTGAGGTGCTAAATGTTGTTTGACTTCTCAGCTTCATATGGGCAAGTAATACAGGAAGAACGGGTCTCACCTCATTGCTCACGCACTTTGTAGTCAGTAGTCAGCGCGCGTCTTTCAAGGTTTTCCATTCCCTTGCTGGGGGTTCAGTCTGTGCGCTATCACTATGAGAGCAGTGTGGTTCAAGCGGTCAATCATCATACTGGGGGGGATCGGGCTCCTCGTCTATGTGGGCATGTTTCTAAAGGGTGGACAAGAGCCTGACAAACATCTGGAGACAAGCATCAACAATCTTTACAATGTAGTCAGAGCTTTTGAGAAAAAGCAGGACACCATGCAGAAAATGCTGGAAGAGGACAGACTCAGATGGAGAAAAGCTGCAGAGGTCGAACAGCCAACTGTCAAAACACAGCCAGAGCAGAAAGAGAAACCTGAAGCAAAAATCCCGGACCAAAAGGAGACTCCTCAAGAGAAAAAGTCTAAGAAACTGTTTCCTAAATCTTCCCTGTTTGTGAATTGGGGGGAAAATCTCTCGGAGGATGACCAAAGAGAGGCACAGGATTTGTTTGTCAAGTATGGATACAACGTTTTTCTCAGCGATCGCCTTCCTCTAGATCGAGCTCTTCCAGATACCAGGGATCCAAGGTGTCTGAAAAAGAGTTACCCAGAAGACTTACCAAGTATTGGAGTAGTGTTGATCTACCTGAATGAGGCCCTGTCTATTATTAAAAGAGCTATGCGCAGTATCATTGACCGCACCCCTAAACACCTGCTGAAGGAGATCATATTGGTGGATGACAATAGCTCTGAAGAAAACCTGAAGGGTGACCTTGACTTGTACGTGAAGTCGATCGAGCAGGAGAACCCAAGTCTCGCTATCATAAGGGTGAGGAACAATGTGTCATATGGCCTGTCTCACGCCAGGGCGTCTGGCTGGAGGGCTGCTACTGCTGACGTGGTGGCCATCCTGGATGCACACATCGAAGTCCATGAGCTGTGGGCAGAACCCCTGCTGACCCAGATCAAGGCTGACCGAACGGTGGTGACGTCCCCTGTGTTTGACAATGTAAAGTTTGATGACTTCAATGTTATTCCATACGATCCATTTGCACAAGGCTTCGACTGGGCTTTATGGTGCATGTATGAGGGCTTTTCGGACGAGTATTACAAACTCAATGACGGCTCGTTGCCTGGAAAAAGTCCATCTGTCATGGGGATCATAGTTGCTGAAAGAAAGTATCTGGGTGAAATCGGACTCCTCGATGAAGGAATGAAAGTGTACGGTGGAGAAAATGTTGAGCTGGGAATTCGAGTGTGGACATGTGGAGGCAGTATTGAAGTAGTTCCATGCTCCAAGATTGGCCACATTGCAAGGGCCCACAAGCCCTACACGCCTGACCTGGACAAAGTCATGAGGAGAAACGCCCTGAGGGTAGCAGAAGTCTGGATGGATGAATACAAACACAACGTCAACTTGGCTTGGAACTTGCCGTTTGAGAATCACGGAATTGACATTGGGGATATCTCTGAAAGGAAAAAACTCAGGGAAAGGTTGAACTGTAAACCTTTCAAATGGTACCTGGAAAATGTGTATCCCAAGTTGGATCCCTTGACTAACCTAGTTGCCTATGGAGGAATAAGGAATATTGATGCTGACAGGTGCTTAGACCAAGGACCAGTGCCAGGTCACATACCCATTGCCTACAGTTGCTACTACTATCAACCTCAAatctgtTATTATCGGTCAAACGGTGAGCTCTATATCGGTGCCATCAAGTCCCACAAGTACAATGACAACCGGTGTTTAACTGACCCGGGGAAAAACGAAACGGAGCCTGGCCTTCATAACTGCAAAGAGGCTAAGCAGAAAGGAATGGGGATTCACTGGGACTTCACTCAGGGCAAAGAACTGAAGAACAAAGATACAAAAAGGTGTCTGGAGATTAAGAATGGCGTGCTTCTGATACAGGAATGCTCTGGCCAAAGATGGGAAATCCAAAACATAATCAAAGCCTTTTAAAGTGTGCGGCCAACAAGAAATGCACTTCTCTGCTCATTGGTCAGTGAATAATATCACCTGAATGTGTACAATGGACACTTGCTCAACAGTTTATGAATGGACAAAGTAATTATTTgtacaatttattattattattgggttTTCATCAGATTCAAACCTGGGGCATAGCATAATATGGGAGGTTAagctttgctttgttttgtatttaaataaaggtttggCTTAGGTACATTTCTTTGATGGCAGCAGTGGTCATAAAAGCATTAATGCTATTAGTTAGATGTAGCTTTTAGGTTTTAGTTCTATAACAATTGACCAACTATTACAAATACTACATCTGGAGGCATTTTTATGCAATAGCTTTGGTGCTGTTAGGTAAATTTCCGGTTTGGAAAATATAAAAGTTCTTCTTAGTAATCTATTTCTACTTTTCTTTGCATTATCATCTGTGACAGAAATAGCCTCCATGTAGAGAAAGGCAAACAAATCATAAGGGGATAGAAAAGTAAAGAAGTAAAGGTGGTATAAATAACATGATTCAGAAAACAAAGTGGTTCATGGATGAGTGATGTTGACGGTGTTCCAGGACAACAGAGTTCTGTTTTCTTGTGCTTCGACAAAGGCCTATGTTTGAAATAATGTCAAatattgatcttttttttttttcctcatttagaAAATAAAGCGTTTACTGGTTGATGTttgaattttgttttttgttttttttaagtgaagttATAGCTGgtgttgtttttgatggtgTTGTGGTTATGGATATTTCTGTTGTGGTTGTTtatatttctgttgcctgtttgaatatttctgtatgtttcctgttttgtataTTGATTCTGTGGATTGTGTgttctgttccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808361.1 True 3109 mRNA 0.42 11 38210958 38245616

Neighbor

gene id symbol gene type direction distance location
ndufa9a ndufa9 coding upstream 102871 38100538 ~ 38108087 (+)
dyrk4 NA coding upstream 111704 38084390 ~ 38099254 (+)
si:dkey-246g23.4 NA coding upstream 203053 37997385 ~ 38007905 (+)
kcng4a kcng4,LOC102784647 coding upstream 231641 37947589 ~ 37979317 (+)
si:dkey-246g23.2 LOC100711201,LOC101469244,LOC102785219,LOC103353460,LOC102212915,LOC106536929 coding upstream 303801 37815654 ~ 37907157 (+)
LOC120563875 LOC102784361,LOC100689846 coding downstream 27219 38272835 ~ 38287885 (+)
LOC120563880 NA coding downstream 114839 38360455 ~ 38361847 (+)
LOC120563876 NA coding downstream 179410 38425026 ~ 38436266 (+)
ribc2 NA coding downstream 191509 38437125 ~ 38441152 (+)
slc25a18 slc25a18,LOC102783608,LOC106926152 coding downstream 260310 38505926 ~ 38516603 (+)
LOC120563874 NA non-coding upstream 77776 38131887 ~ 38133182 (+)
LOC120564394 NA non-coding upstream 156780 38052905 ~ 38054178 (+)
G90575 NA non-coding upstream 214185 37996560 ~ 37996773 (+)
G90523 NA non-coding upstream 512981 37697764 ~ 37697977 (+)
G90311 NA non-coding upstream 1488131 36721925 ~ 36722827 (+)
G90624 NA non-coding downstream 23810 38269426 ~ 38272172 (+)
LOC120563884 NA non-coding downstream 56680 38302296 ~ 38303645 (+)
G90635 NA non-coding downstream 207186 38452802 ~ 38454316 (+)
G90655 NA non-coding downstream 306711 38552327 ~ 38555712 (+)
G90653 wee2 non-coding downstream 311041 38556657 ~ 38558151 (+)
G90583 NA other upstream 155394 38054509 ~ 38055564 (+)
wfdc1 wfdc1,LOC102778323 other upstream 176264 38022377 ~ 38034694 (+)
mt2 NA other upstream 1678962 36530973 ~ 36531996 (+)
anapc13 anapc13 other upstream 1693037 36516011 ~ 36517921 (+)
G90142 NA other upstream 2425542 35784694 ~ 35785416 (+)
G90686 NA other downstream 412750 38658366 ~ 38680087 (+)
G90693 NA other downstream 631434 38877050 ~ 38879902 (+)
LOC120563436 NA other downstream 1626074 39871690 ~ 39874177 (+)
LOC120564712 LOC108250350,LOC108250755 other downstream 2227232 40472848 ~ 40502827 (+)
gins3 gins3 other downstream 2457565 40703181 ~ 40710433 (+)

Expression


Co-expression Network