Gene
RNA
| Item | Value |
|---|---|
| gene id | exosc6 |
| gene name | exosc6 |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053119.1 |
| NCBI id | CM020916.1 |
| chromosome length | 42187026 |
| location | 36429502 ~ 36431389 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| exosc6 | Predicted to enable RNA binding activity. Predicted to be involved in RNA metabolic process. Predicted to act upstream of or within rRNA processing. Predicted to be located in cytoplasm and nucleus. Predicted to be part of cytoplasmic exosome (RNase complex) and nuclear exosome (RNase complex). Predicted to be active in nucleolus. Is expressed in forebrain; hindbrain; immature eye; midbrain; and optic tectum. Orthologous to human EXOSC6 (exosome component 6). |
| description |
|---|
| exosome complex component MTR3 |
| id | description |
|---|---|
| K12587 | MTR3, EXOSC6; exosome complex component MTR3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039808455.1 | True | 1071 | mRNA | 0.52 | 2 | 36429502 | 36431389 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| st3gal2 | st3gal2,LOC102780992 | coding | upstream | 39239 | 36368761 ~ 36390263 (+) |
| siah1 | siah1,LOC102794717 | coding | upstream | 323052 | 36065628 ~ 36106450 (+) |
| n4bp1 | n4bp1,LOC101465464 | coding | upstream | 381091 | 36018268 ~ 36048411 (+) |
| cbln1 | cbln1,LOC104949597 | coding | upstream | 735797 | 35659713 ~ 35693705 (+) |
| si:ch211-212o1.2 | LOC103358434,LOC100695703,LOC102310624 | coding | upstream | 842961 | 35512384 ~ 35586541 (+) |
| tgm2l | LOC103363999,LOC104953692,LOC102308322 | coding | downstream | 13704 | 36445093 ~ 36458111 (+) |
| trnal-cag_1 | NA | coding | downstream | 32097 | 36463486 ~ 36463568 (+) |
| LOC120564167 | NA | coding | downstream | 34306 | 36465695 ~ 36489643 (+) |
| steep1 | clg7hxorf56,csgr13hxorf56,LOC104938431,LOC101478835,LOC103368976 | coding | downstream | 102826 | 36534215 ~ 36535887 (+) |
| nup93 | nup93,LOC103368977 | coding | downstream | 112379 | 36543768 ~ 36577859 (+) |
| G90241 | aars,LOC102788534 | non-coding | upstream | 29432 | 36397291 ~ 36400070 (+) |
| G90236 | NA | non-coding | upstream | 61072 | 36312714 ~ 36368430 (+) |
| G90238 | NA | non-coding | upstream | 71284 | 36352310 ~ 36358218 (+) |
| G90218 | NA | non-coding | upstream | 173936 | 36255175 ~ 36255566 (+) |
| G90217 | NA | non-coding | upstream | 174679 | 36254401 ~ 36254823 (+) |
| LOC120563368 | NA | non-coding | downstream | 162767 | 36594156 ~ 36595693 (+) |
| G90311 | NA | non-coding | downstream | 290536 | 36721925 ~ 36722827 (+) |
| G90523 | NA | non-coding | downstream | 1266375 | 37697764 ~ 37697977 (+) |
| G90575 | NA | non-coding | downstream | 1565171 | 37996560 ~ 37996773 (+) |
| LOC120564394 | NA | non-coding | downstream | 1621516 | 38052905 ~ 38054178 (+) |
| G90142 | NA | other | upstream | 644086 | 35784694 ~ 35785416 (+) |
| LOC120563677 | gnao1,LOC103367675,LOC108249535,LOC107660763,LOC100693875 | other | upstream | 1439090 | 34847563 ~ 34990412 (+) |
| G89836 | NA | other | upstream | 1994185 | 34434089 ~ 34435317 (+) |
| G89813 | NA | other | upstream | 2008321 | 34381836 ~ 34421181 (+) |
| G89811 | LOC100698998 | other | upstream | 2067125 | 34360484 ~ 34362377 (+) |
| anapc13 | anapc13 | other | downstream | 84622 | 36516011 ~ 36517921 (+) |
| mt2 | NA | other | downstream | 99584 | 36530973 ~ 36531996 (+) |
| wfdc1 | wfdc1,LOC102778323 | other | downstream | 1590988 | 38022377 ~ 38034694 (+) |
| G90583 | NA | other | downstream | 1623120 | 38054509 ~ 38055564 (+) |
| G90686 | NA | other | downstream | 2226977 | 38658366 ~ 38680087 (+) |
