c8h12orf4 (clg7h12orf4,LOC103368969,LOC102309763,LOC101476100,LOC102208700)


Basic Information

Item Value
gene id c8h12orf4
gene name clg7h12orf4,LOC103368969,LOC102309763,LOC101476100,LOC102208700
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 36728907 ~ 36759824 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808512.1
tcagCTGATAGAAGTGAACAGGAGCCCCCCGTCTCTGCAGCAGGAAACGCCGATATTCATTCATTCTCAGCCGCGAACATGAAGAAGAACAAAGGCAAAGCCAACAGTACTGTTGAGAAGGAGTTTGTGTTTGAGTTCAGGGCAGGGAAACACAACTGTGTCCTCAAAGTGCCTCTGCAGTTTCCTGTTCAAGAGAACATCAGGGACCTTCATGGACGCCTGATGCTGCTACATAAAATACCCTGCTACATAGAAAATGAGCTAAAGACCTCTCTTTCCGACTTCATGGAGAGGGAGACCACCGTGGATTATGACCGAGAGGCGGAGCTGGCCCTGCAAAGACTCACAACGGGAGATGTAGACGTGAACCAGCTCACTAACGCGTGGGCCAGGTCTTATGTGGAGACTACGCTGGAGCACGCCCGACCCGAAGAGCCCAGTTGGGATGAGGACTTTGCTGATGTTTACCATGAGCTGATCCACTCGCCTGCCTCAGACACCCTTCTCAACCTGGAGCACAACTACTTTGTTAGCATCTCCGAGCTAATCAGCGAGAGAGACATGGAGATTAAGAAGCTACAAGAGAGGCAAGCCGCTGAAATGGACAAAGTGATGCATCAGCTGGGGAATACTTTGAGCGACCAGGATGTAAATACAGTTGCCTCTCAACACTTTGATGCAcagcagGTGTTGGAGAACAAGTGGGCCAGTGAGCTGAAGCAAGTGACTGGCATTCAGAAGCACGAGTATCAGGAGTGGGTCATTAGTCTGCACCAGGACCTGCAGAAATCCAACAACAGCAGCCAAATCAATGAGGAGATCAAGGTGCAGTCCAGCCAGCTGTCGGAGCTGGCAGATTCTGGGGCCAGGATGTTTGAGGAGCAGCCTCAGCTGGAGGAGAGTTTCACCATACACTTAGGAGCGCAACTGAAGACGATGCATAACCTGCGGCTGGTCCGGGCAGACGTGCTGGACTTGTGTAAGCACCGGCGGCACGGCAGCGGCGGAGAAAAGCTGCGGCGGCTGCAGACGGCCCTCTCGCTCTactcctcctccctctgtggACTGGTGCTGCTGGTCGACAACAGGGTCAACTCCTACAGCGGCATCAAGAGAGACTTTGCAACTGTGGCGAAGGAGTGTACAGACTTCCACTTTCCCTGTCTGGAGGCGCAGCTGGACGAGGTGCAGCAGGTGGAGCTCTATGCCAGAGCCCAGCGGAGCAGCAAGCAGAAAGAACAGCCTGAGATTCCAAGGAACGGAGGCGACGATAAGAGCAAAAATGTGGAAAGAAATCCGTCTAACATCTTACCAGGTGAGTTTTACATCTCGCGGCACTCCAACCTGTCCGAGGTCCACGTTGTCTTCCACCTGTGCGTGGACGACAACGTGCGCTCAGGGAACATCACGGCCCGGGACCCGGCCATCATGGGCTTGAGAAACATCCTGAAGGTGTGCTGCACGCACGACGTCACCACGGTGACCGTCCCTCTGCTGCTGGTCCACGACATGTCAGAGGAGATGACCATACCGTGGTGTCTTAAGAGAGCCGAGCTGGTGTTCAAATGTGTCAAAGGCTTTATGATGGAAATGGCCTCGTGGGATGGAGGAATATCGCGCACAGTCCAGTTTCTAGTGCCAAAGAGTATCTCAGAGGAGATGTTCTACCAGTTGAGCAACATGCTGCCTCAGATCTTCCGCGTCTCCTCCACCCTAACTCTCACCTCAAAGCACTGAAGAATAGAGGTGCACCACATCTCATCCTCAAGGCATTCTGACTAAACCCAGAcccatttattttaaccattacacaaacacattctAGTTCTGGCTTTTCTTCTGTAGGAACTGTAGATTAAAGGAGTTGGGGATTAGTGGGAAAAGTAGCACATAGAATTGGGGTCAACATGTGGCATTAAGGCACTTACAGTAGAGGTGcgaaaaaagatttaaaatgtaatgtgaaattataattttattttgccCCTTTCAGAGCTACACTCGCTGTAAATAGTTCTTACTGAAAGATGACTGGATTCAGTGGCTCACCAAAGCAGCCGCTGCAATTATCATTTCAAGCCTCCAGGGTGCGGTTCTGATGACTAGAGTTTTATGACATCATGACCTCAGCCGCCAGCGCTGCAAGTATTCCAGTTTCccattttaaagctgcagtcTGTAACTTTCCGCATGTTCGAGCTACAGCATAGTGGAGAATGTAGTGCTGCGTTGGTGAGGTAGATTTAACTCGCTGGTATGGAGTGAGAAATGCCATCGACGGAGCAGATAAAGCAAATGTGAAAACCCAGTATTGTTTACTAAAGTGATGAAGCTGGATGGAACCGGCACTGGCAGTTACACAGGTGTGACCTTACTCTTATTAGCAACCATGctaaatgtgactttttttgtgtgtgtgttttcaccaCACATTACCTAGGGCTGCTCGATCATGgcaaaaatcataatcacaatcaTTTTTGGTGAATTTTGAGATCATTATTATTCAACACGATTACTCAATGACTCAATGTCTTCTCTTGAACTTTAAATCTAAATCCTTAACATATATTCAATCTATAAAATAAAGCAATACAttaaactagagctgggcaatatatcgatattatatgagactagatatcgtcttagattttggatattgtaatatggcataagtgttgtcttttcctggttttaaa
>XM_039808513.1
CCTCTTTTGTCTTCTGCATCTGACTGGCCTCTCTTATACTCTCTGCATGTGCAGCAGATCATCACCCACAATTACAGTTTGAGTTTTATACAGTGGAGCAACCATGCAGCATGACTACGCTGGAGCACGCCCGACCCGAAGAGCCCAGTTGGGATGAGGACTTTGCTGATGTTTACCATGAGCTGATCCACTCGCCTGCCTCAGACACCCTTCTCAACCTGGAGCACAACTACTTTGTTAGCATCTCCGAGCTAATCAGCGAGAGAGACATGGAGATTAAGAAGCTACAAGAGAGGCAAGCCGCTGAAATGGACAAAGTGATGCATCAGCTGGGGAATACTTTGAGCGACCAGGATGTAAATACAGTTGCCTCTCAACACTTTGATGCAcagcagGTGTTGGAGAACAAGTGGGCCAGTGAGCTGAAGCAAGTGACTGGCATTCAGAAGCACGAGTATCAGGAGTGGGTCATTAGTCTGCACCAGGACCTGCAGAAATCCAACAACAGCAGCCAAATCAATGAGGAGATCAAGGTGCAGTCCAGCCAGCTGTCGGAGCTGGCAGATTCTGGGGCCAGGATGTTTGAGGAGCAGCCTCAGCTGGAGGAGAGTTTCACCATACACTTAGGAGCGCAACTGAAGACGATGCATAACCTGCGGCTGGTCCGGGCAGACGTGCTGGACTTGTGTAAGCACCGGCGGCACGGCAGCGGCGGAGAAAAGCTGCGGCGGCTGCAGACGGCCCTCTCGCTCTactcctcctccctctgtggACTGGTGCTGCTGGTCGACAACAGGGTCAACTCCTACAGCGGCATCAAGAGAGACTTTGCAACTGTGGCGAAGGAGTGTACAGACTTCCACTTTCCCTGTCTGGAGGCGCAGCTGGACGAGGTGCAGCAGGTGGAGCTCTATGCCAGAGCCCAGCGGAGCAGCAAGCAGAAAGAACAGCCTGAGATTCCAAGGAACGGAGGCGACGATAAGAGCAAAAATGTGGAAAGAAATCCGTCTAACATCTTACCAGGTGAGTTTTACATCTCGCGGCACTCCAACCTGTCCGAGGTCCACGTTGTCTTCCACCTGTGCGTGGACGACAACGTGCGCTCAGGGAACATCACGGCCCGGGACCCGGCCATCATGGGCTTGAGAAACATCCTGAAGGTGTGCTGCACGCACGACGTCACCACGGTGACCGTCCCTCTGCTGCTGGTCCACGACATGTCAGAGGAGATGACCATACCGTGGTGTCTTAAGAGAGCCGAGCTGGTGTTCAAATGTGTCAAAGGCTTTATGATGGAAATGGCCTCGTGGGATGGAGGAATATCGCGCACAGTCCAGTTTCTAGTGCCAAAGAGTATCTCAGAGGAGATGTTCTACCAGTTGAGCAACATGCTGCCTCAGATCTTCCGCGTCTCCTCCACCCTAACTCTCACCTCAAAGCACTGAAGAATAGAGGTGCACCACATCTCATCCTCAAGGCATTCTGACTAAACCCAGAcccatttattttaaccattacacaaacacattctAGTTCTGGCTTTTCTTCTGTAGGAACTGTAGATTAAAGGAGTTGGGGATTAGTGGGAAAAGTAGCACATAGAATTGGGGTCAACATGTGGCATTAAGGCACTTACAGTAGAGGTGcgaaaaaagatttaaaatgtaatgtgaaattataattttattttgccCCTTTCAGAGCTACACTCGCTGTAAATAGTTCTTACTGAAAGATGACTGGATTCAGTGGCTCACCAAAGCAGCCGCTGCAATTATCATTTCAAGCCTCCAGGGTGCGGTTCTGATGACTAGAGTTTTATGACATCATGACCTCAGCCGCCAGCGCTGCAAGTATTCCAGTTTCccattttaaagctgcagtcTGTAACTTTCCGCATGTTCGAGCTACAGCATAGTGGAGAATGTAGTGCTGCGTTGGTGAGGTAGATTTAACTCGCTGGTATGGAGTGAGAAATGCCATCGACGGAGCAGATAAAGCAAATGTGAAAACCCAGTATTGTTTACTAAAGTGATGAAGCTGGATGGAACCGGCACTGGCAGTTACACAGGTGTGACCTTACTCTTATTAGCAACCATGctaaatgtgactttttttgtgtgtgtgttttcaccaCACATTACCTAGGGCTGCTCGATCATGgcaaaaatcataatcacaatcaTTTTTGGTGAATTTTGAGATCATTATTATTCAACACGATTACTCAATGACTCAATGTCTTCTCTTGAACTTTAAATCTAAATCCTTAACATATATTCAATCTATAAAATAAAGCAATACAttaaactagagctgggcaatatatcgatattatatgagactagatatcgtcttagattttggatattgtaatatggcataagtgttgtcttttcctggttttaaa

Function

NR:

description
PREDICTED: uncharacterized protein C12orf4 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808512.1 True 2702 mRNA 0.48 14 36728907 36759824
XM_039808513.1 False 2410 mRNA 0.48 12 36737703 36759824

Neighbor

gene id symbol gene type direction distance location
lrrc29 lrrc29,LOC104953705,LOC102207977,LOC102302674 coding upstream 45421 36667110 ~ 36683486 (+)
LOC120564181 LOC100709340,LOC102206288,LOC101464383,LOC102303471,LOC103368978 coding upstream 66101 36625898 ~ 36662806 (+)
mmp15a LOC103368972,LOC102304799,LOC104953712 coding upstream 107663 36596925 ~ 36621244 (+)
zpd NA coding upstream 139751 36582894 ~ 36589156 (+)
nup93 nup93,LOC103368977 coding upstream 151048 36543768 ~ 36577859 (+)
slc45a3 slc45a3 coding downstream 6013 36765837 ~ 36811249 (+)
LOC120563960 fgf6,LOC102786981 coding downstream 57836 36817660 ~ 36826675 (+)
LOC120563959 NA coding downstream 71804 36831628 ~ 36834314 (+)
cdh13 cdh13 coding downstream 449331 37209155 ~ 37669480 (+)
zgc:173742 LOC103353462,LOC108237534,LOC106536918,LOC100710935 coding downstream 1009260 37769084 ~ 37810098 (+)
G90311 NA non-coding upstream 6080 36721925 ~ 36722827 (+)
LOC120563368 NA non-coding upstream 133214 36594156 ~ 36595693 (+)
G90241 aars,LOC102788534 non-coding upstream 328837 36397291 ~ 36400070 (+)
G90236 NA non-coding upstream 360477 36312714 ~ 36368430 (+)
G90238 NA non-coding upstream 370689 36352310 ~ 36358218 (+)
G90523 NA non-coding downstream 937940 37697764 ~ 37697977 (+)
G90575 NA non-coding downstream 1236736 37996560 ~ 37996773 (+)
LOC120564394 NA non-coding downstream 1293081 38052905 ~ 38054178 (+)
LOC120563874 NA non-coding downstream 1372063 38131887 ~ 38133182 (+)
G90624 NA non-coding downstream 1509602 38269426 ~ 38272172 (+)
mt2 NA other upstream 196911 36530973 ~ 36531996 (+)
anapc13 anapc13 other upstream 210986 36516011 ~ 36517921 (+)
G90142 NA other upstream 943491 35784694 ~ 35785416 (+)
LOC120563677 gnao1,LOC103367675,LOC108249535,LOC107660763,LOC100693875 other upstream 1738495 34847563 ~ 34990412 (+)
G89836 NA other upstream 2293590 34434089 ~ 34435317 (+)
wfdc1 wfdc1,LOC102778323 other downstream 1262553 38022377 ~ 38034694 (+)
G90583 NA other downstream 1294685 38054509 ~ 38055564 (+)
G90686 NA other downstream 1898542 38658366 ~ 38680087 (+)
G90693 NA other downstream 2117226 38877050 ~ 38879902 (+)
LOC120563436 NA other downstream 3111866 39871690 ~ 39874177 (+)

Expression


Co-expression Network