LOC120563959


Basic Information

Item Value
gene id LOC120563959
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 36831628 ~ 36834314 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808519.1
ACTTTCTCCTCCGGCAGTATAGCTGCTCACACACCAACCTGAAACACTTGTTCTGTAAAGAGTAAAGAGAGCACGGCATCCCCCATTGATCATGCAAGCGGCTTTCTTCTCACTCATCCTGATTGCCGTACATGTGTCTGTACCGGTGGATTGTGCACCGGCGCTCCGGGACCCAGAGCAACTTGTACGACGTCGGCAGAGCAGCTTCCACGCAGGAGCACGTGCGGATGCATCCGCTGGTACGGGACCTTTCTACTTGGAGCTGAGTGGATCAATGAGAAAAGGCAttcatacacagacagacagacactttcTGGTTATTTTGCCAGAAAGAAGAGATACGAGCAACTATGTGTTAATATTGGATTTGAGAAGAAAACGCTACCTCTGTGTGGACTCAAAGGGACAGCAGTACAACTCTAGGCAAAAGGGCCCAGAAGATTGTCTCTTCCAGCACATTTGGTTAGATTTGGTGAACCACCATGACGTGTTTTACTCTATAAGTGGGGGCCGGCTGCTCAAAGTGGAGGGAGCTGATCCCTCCTCAGCCCTGGCCCAGAACTTCCTGGGTTCTTTGgtgaagagacagaggaggagtgaGAGAGTGAACCCCTCTGATCCATTCAGATCACAGTCCCATCCTTCCCATTCTGCCAAGGATCACCGGGATGCAGATGGCAGGCAGCGTGAACGGGACCAGGCCGGTGCTGTGTCCAAAGAGACCATCACCTCCTGCGATGACCCCCTCCGGGTCCTACAGTCCAACGGGCCCGTCAGTCCCGTCAAGACCAACATTGCAGACCGAGCAGAACAAGACTAAGATACCGAACTTGGGTTTAATGAGAGTAAAAGtcaagagaggggggcaagtCTTTCCGTTTGTTCTAAGAACTCGTTTCATGTTTGACTGCATTAGTGGCAGtagagctgggtgatatggagaaaatcaattattattatttattatttttgaccaaatacctcaatgtcgatatCGCGGCGATagtgtagggttgacaattggtttAAGATAAATTATCAtcaatgtggatataatgactaagtgatTAAAGGCAAATGATAGAACAGCTACaatagtctggtaagttcagaaaatgacatcactttactgtaacacagcctttaaaaccaagaaaagacaacacttgtc
>XM_039808520.1
ACTTTCTCCTCCGGCAGTATAGCTGCTCACACACCAACCTGAAACACTTGTTCTGTAAAGAGTAAAGAGAGCACGGCATCCCCCATTGATCATGCAAGCGGCTTTCTTCTCACTCATCCTGATTGCCGTACATGTGTCTGTACCGGTGGATTGTGCACCGGCGCTCCGGGACCCAGAGCAACTTGTACGACGTCGGCAGAGCAGCTTCCACGCAGGAGCACGTGCGGATGCATCCGCTGTTATTTTGCCAGAAAGAAGAGATACGAGCAACTATGTGTTAATATTGGATTTGAGAAGAAAACGCTACCTCTGTGTGGACTCAAAGGGACAGCAGTACAACTCTAGGCAAAAGGGCCCAGAAGATTGTCTCTTCCAGCACATTTGGTTAGATTTGGTGAACCACCATGACGTGTTTTACTCTATAAGTGGGGGCCGGCTGCTCAAAGTGGAGGGAGCTGATCCCTCCTCAGCCCTGGCCCAGAACTTCCTGGGTTCTTTGgtgaagagacagaggaggagtgaGAGAGTGAACCCCTCTGATCCATTCAGATCACAGTCCCATCCTTCCCATTCTGCCAAGGATCACCGGGATGCAGATGGCAGGCAGCGTGAACGGGACCAGGCCGGTGCTGTGTCCAAAGAGACCATCACCTCCTGCGATGACCCCCTCCGGGTCCTACAGTCCAACGGGCCCGTCAGTCCCGTCAAGACCAACATTGCAGACCGAGCAGAACAAGACTAAGATACCGAACTTGGGTTTAATGAGAGTAAAAGtcaagagaggggggcaagtCTTTCCGTTTGTTCTAAGAACTCGTTTCATGTTTGACTGCATTAGTGGCAGtagagctgggtgatatggagaaaatcaattattattatttattatttttgaccaaatacctcaatgtcgatatCGCGGCGATagtgtagggttgacaattggtttAAGATAAATTATCAtcaatgtggatataatgactaagtgatTAAAGGCAAATGATAGAACAGCTACaatagtctggtaagttcagaaaatgacatcactttactgtaacacagcctttaaaaccaagaaaagacaacacttgtc

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05133 Pertussis
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808519.1 True 1171 mRNA 0.48 3 36831628 36834314
XM_039808520.1 False 1093 mRNA 0.48 3 36831628 36834314

Neighbor

gene id symbol gene type direction distance location
LOC120563960 fgf6,LOC102786981 coding upstream 4953 36817660 ~ 36826675 (+)
slc45a3 slc45a3 coding upstream 20379 36765837 ~ 36811249 (+)
c8h12orf4 clg7h12orf4,LOC103368969,LOC102309763,LOC101476100,LOC102208700 coding upstream 71804 36728907 ~ 36759824 (+)
lrrc29 lrrc29,LOC104953705,LOC102207977,LOC102302674 coding upstream 148142 36667110 ~ 36683486 (+)
LOC120564181 LOC100709340,LOC102206288,LOC101464383,LOC102303471,LOC103368978 coding upstream 168822 36625898 ~ 36662806 (+)
cdh13 cdh13 coding downstream 374841 37209155 ~ 37669480 (+)
zgc:173742 LOC103353462,LOC108237534,LOC106536918,LOC100710935 coding downstream 934770 37769084 ~ 37810098 (+)
si:dkey-246g23.2 LOC100711201,LOC101469244,LOC102785219,LOC103353460,LOC102212915,LOC106536929 coding downstream 981340 37815654 ~ 37907157 (+)
kcng4a kcng4,LOC102784647 coding downstream 1113275 37947589 ~ 37979317 (+)
si:dkey-246g23.4 NA coding downstream 1163071 37997385 ~ 38007905 (+)
G90311 NA non-coding upstream 108801 36721925 ~ 36722827 (+)
LOC120563368 NA non-coding upstream 235935 36594156 ~ 36595693 (+)
G90241 aars,LOC102788534 non-coding upstream 431558 36397291 ~ 36400070 (+)
G90236 NA non-coding upstream 463198 36312714 ~ 36368430 (+)
G90523 NA non-coding downstream 863450 37697764 ~ 37697977 (+)
G90575 NA non-coding downstream 1162246 37996560 ~ 37996773 (+)
LOC120564394 NA non-coding downstream 1218591 38052905 ~ 38054178 (+)
LOC120563874 NA non-coding downstream 1297573 38131887 ~ 38133182 (+)
G90624 NA non-coding downstream 1435112 38269426 ~ 38272172 (+)
mt2 NA other upstream 299632 36530973 ~ 36531996 (+)
anapc13 anapc13 other upstream 313707 36516011 ~ 36517921 (+)
G90142 NA other upstream 1046212 35784694 ~ 35785416 (+)
LOC120563677 gnao1,LOC103367675,LOC108249535,LOC107660763,LOC100693875 other upstream 1841216 34847563 ~ 34990412 (+)
G89836 NA other upstream 2396311 34434089 ~ 34435317 (+)
wfdc1 wfdc1,LOC102778323 other downstream 1188063 38022377 ~ 38034694 (+)
G90583 NA other downstream 1220195 38054509 ~ 38055564 (+)
G90686 NA other downstream 1824052 38658366 ~ 38680087 (+)
G90693 NA other downstream 2042736 38877050 ~ 38879902 (+)
LOC120563436 NA other downstream 3037376 39871690 ~ 39874177 (+)

Expression


Co-expression Network